Candidatus Lokiarchaeum ossiferum: NEF87_000588
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Entry
NEF87_000588 CDS
T09593
Name
(GenBank) 4-hydroxybutyrate--CoA ligase 2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob00061
Fatty acid biosynthesis
lob00071
Fatty acid degradation
lob01100
Metabolic pathways
lob01212
Fatty acid metabolism
lob02024
Quorum sensing
lob04146
Peroxisome
Module
lob_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NEF87_000588
00071 Fatty acid degradation
NEF87_000588
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NEF87_000588
09145 Cellular community - prokaryotes
02024 Quorum sensing
NEF87_000588
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lob01004
]
NEF87_000588
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lob04147
]
NEF87_000588
Enzymes [BR:
lob01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NEF87_000588
Lipid biosynthesis proteins [BR:
lob01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NEF87_000588
Exosome [BR:
lob04147
]
Exosomal proteins
Exosomal proteins of breast milk
NEF87_000588
Exosomal proteins of breast cancer cells
NEF87_000588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UYP44303
LinkDB
All DBs
Position
685996..687735
Genome browser
AA seq
579 aa
AA seq
DB search
MVNETNVEWINATNPDIIHKEEYDWYKSWPKGVRKQLKYPKMGLNEVFKESVSRNADMTY
LSILGIDYSYSKVNEMANRFANAMLAKGYGIGDRIAIFMPNLPQFVFVFYGILKIGATVV
PISPLLGKEDLKKIINDSQISALVGLDILFPNIESIISESNSLKNVILTSLGDLLSPIVR
VIAKIVGKIPKTPKINIPFENLYTLFKNNSDEEVLINVKPDKDIAVIGYTGGTTGTPKGA
MLTHENLVSNLHQGREWARITHPIGIHKKFVGAVPFFHIIGLNAVMLVSMFYDSTVYLFP
DPRKFESILQSIEKYKINYFHGVPTLHQAIINHTNFDKYNLSSLELIFSGAAPLPEELGK
EIEKKTGAMVIEAYGMTETSPMVAANPFEKNNHRFGTIGIPFPDTLIKIFDESRQNEMPG
GEIGEIAIKGPQIMKGYWNNPDETKNMLQNGYLFTGDMGYFDIDGYIHLVNRKKDMIIAS
GFKVFPSEIESIVLQKFPEIKEAVITGAPDEYRGETVKLIAVLRENVSISKEKIINYLRE
SVAHYKIPKIIEFREILPKTGIGKTDRLAIRKQEFHMNS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgaaacaaatgtagagtggataaatgcaacaaatcccgatattattcataaa
gaggaatatgattggtataaatcttggcctaaaggggttcggaagcagcttaaatatcca
aaaatgggacttaatgaggttttcaaggaatccgtttctagaaatgcggatatgacatat
ttaagtatattgggtattgattattcctattctaaagtgaatgaaatggccaatcggttt
gccaatgcaatgttagccaaaggatatggaattggggaccgaattgcaatttttatgcca
aatctacctcaatttgtattcgtgttctatggaattttgaagattggggcaactgtcgtt
ccaatctcacccttgttaggaaaagaagatttgaaaaaaattatcaatgatagccaaatt
tctgcgcttgtgggattagatatactctttccaaatatcgaatcgattatttctgaatca
aattctttgaagaatgtaattttgacatccttaggagatttactgtcgccaattgttcgg
gtgattgctaaaatcgtagggaaaatacctaaaaccccaaaaatcaatataccatttgaa
aatttgtataccttatttaagaacaattctgatgaagaagttcttattaatgttaaacca
gataaagatatcgcagtaattgggtatactggtggaactactggtactcccaagggagca
atgttaacccatgaaaatttagtttcaaatttgcatcaaggaagagaatgggcacgaatt
actcatccgattgggatccacaagaaatttgttggagcagttccctttttccatattata
ggactaaatgcagttatgttggtttcaatgttttatgatagcacggtatatttgttccca
gatccaagaaaatttgaatctatcttgcaatcaattgaaaaatataaaataaactatttt
cacggcgttccaacccttcatcaagcgataattaatcataccaactttgataaatacaac
ttaagctcccttgaactcattttttcaggagcagcacctctccctgaagaattaggaaaa
gaaatagagaaaaaaacgggtgcaatggtcattgaagcctatggaatgaccgaaactagc
ccaatggttgctgccaatccttttgaaaagaataatcatagatttggaacaatcggaatt
ccatttccagatacattaatcaaaatttttgatgagtccagacagaacgaaatgcccggt
ggagaaattggagaaattgcaatcaaaggacctcaaattatgaaaggatactggaataat
ccagatgaaacaaaaaacatgcttcaaaatggatatctgttcactggagatatgggttac
tttgatatagatggatatattcatttagtgaataggaaaaaggatatgattattgcttca
gggttcaaagtgtttccaagcgaaattgaatcaatagtgcttcaaaaattccccgaaatt
aaagaagcagtaattacaggtgcaccagacgaatatcgaggtgaaacagtcaaattgata
gcagtcctacgtgagaatgtatctatttcgaaagaaaagattattaattatctacgagag
agtgtggcacattacaaaataccaaaaatcattgaatttcgggaaatcttgccaaaaaca
ggaatcggcaaaacagacagacttgcgattcgaaaacaagaatttcatatgaattcttga
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