Candidatus Lokiarchaeum ossiferum: NEF87_000659
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Entry
NEF87_000659 CDS
T09593
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lob03016
]
NEF87_000659
Enzymes [BR:
lob01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NEF87_000659
Transfer RNA biogenesis [BR:
lob03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NEF87_000659
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
UYP44374
UniProt:
A0ABY6HP93
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All DBs
Position
810634..811260
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AA seq
208 aa
AA seq
DB search
MNNPSNQAKIKTNDNHTEEDPSEIIIVEGKFNDKKVILPFSLTSQQLFDKNYFGTQLPDK
QLELEIVEALLLIERSRLKVFNVQNQEMTAEQILALYSKHDEKIWVKYLVYRDIRQRGYI
VRTGYGEGIDFRVYPRGSSRTVGVAKYFIFILDEENPVHLQKLDKITQQTLNSRKELILA
IVDRLGDPTYYQLEQFQLKENTKKEKFW
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccatcaaatcaagcaaaaattaaaacaaatgacaatcatacagaagaagac
ccttcggaaataattatagtagaagggaaatttaatgataaaaaagtcatactcccattt
tcccttacaagccaacagctatttgataaaaactattttgggactcaattaccagataaa
caactcgaattagaaatagttgaagctttactcttgatagaacgaagtcgtttgaaagtt
ttcaatgttcaaaatcaagaaatgacagccgaacaaattcttgcgttgtattcaaaacat
gatgaaaaaatctgggtcaaatatctcgtatatcgagatattcgccaacgtggttatatc
gtgcgaacggggtatggtgaagggatagattttcgagtttatccacgaggttcaagtcga
accgtgggtgttgcgaaatattttattttcatcttagatgaagaaaatccagttcattta
caaaagttagataaaataacccaacaaacacttaactcacggaaagaacttatattagca
attgtagatcgtcttggagaccctacatattatcaacttgaacaatttcaactaaaagaa
aataccaaaaaagaaaaattttggtaa
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