Candidatus Lokiarchaeum ossiferum: NEF87_000967
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Entry
NEF87_000967 CDS
T09593
Name
(GenBank) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEF87_000967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_000967
Transcription machinery [BR:
lob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NEF87_000967
Prokaryotic type
Archaeal type
TFB
NEF87_000967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UYP44682
LinkDB
All DBs
Position
1191465..1192502
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AA seq
345 aa
AA seq
DB search
MTETIGNYHKKKHLGATFVHDPSTGSDHIPMDSIDGHVTPSDTCESKRQYKKKDRSRQIG
KVEIDRIDCTDCGSEELIQDDVTGDLICTSCGMVVESHMFFTDKSAISFTNYDDEIIKKN
SVSAKRKDPISEKLFQKLKKAEKWTHTWADIHQIIMKKEINRYIYQLELPEYIGESAGNL
YAKIYRKNAIQGRGIKAMVAATVYTTCRQHQIPVFFQDIEKVSKQEHSTIRKCFTYIMDN
FQITLPVLSARQFIPQLVAKLQFSDLLEKVATKVLTRLESSQIGDSINNPKHLASISIFF
AYNIMKRANKLNVSITQKDFSNKVGMSETTLRKYKRIFQQAITVR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacaattggaaactaccacaaaaagaaacaccttggcgcaaccttcgtccat
gacccatcaaccggatcagatcatatcccgatggattcgattgatgggcatgtgacacct
tctgacacctgtgaatcaaaacgacaatacaaaaagaaggatcgttcacgacaaattgga
aaagttgaaattgatagaatcgattgcaccgattgcggatctgaagaacttattcaagat
gatgtgacaggagatttaatttgcacaagttgtggtatggtcgtagaatcacatatgttt
ttcacagataaatctgctatcagttttaccaattatgatgatgaaataattaaaaaaaac
tcagtatctgccaaacgcaaagatcctattagtgaaaaattattccaaaagctaaaaaaa
gcagaaaaatggactcacacatgggcagacattcatcaaattattatgaagaaagaaatt
aatagatatatttaccaattagaattacctgaatacattggagaaagtgctggaaatctg
tacgcgaaaatttatcgcaaaaatgcaattcaaggaagaggaataaaagcaatggtcgct
gccacggtgtataccacttgtagacaacaccaaattccggtgttcttccaagatattgag
aaagttagcaaacaagaacattcaaccatccgaaaatgctttacttatatcatggataat
ttccaaattacacttcctgttttaagtgcgagacaatttattccgcaattggtagctaaa
ctccaattttcggatttattggaaaaagtggccacaaaagtcttaactcgattagaatca
agccaaattggagattcaattaataatccaaaacatttggcatccatatccatctttttt
gcctacaacattatgaaaagggcaaataagctgaatgtgagtatcacccaaaaagatttt
tccaataaagtcggcatgagtgaaacaactctccgaaaatacaaaagaatattccaacaa
gcaatcacagtaagataa
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