Candidatus Lokiarchaeum ossiferum: NEF87_001216
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Entry
NEF87_001216 CDS
T09593
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lob03016
]
NEF87_001216
Enzymes [BR:
lob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NEF87_001216
Transfer RNA biogenesis [BR:
lob03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NEF87_001216
Prokaryotic type
NEF87_001216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UYP44931
LinkDB
All DBs
Position
complement(1499890..1500909)
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AA seq
339 aa
AA seq
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MELKFLGTSGATPTMDRNLPAIAMRLDSGEIILFDAGEDVQRRFEAAKLKFNVPTTILIS
HLHGDHVIGLPGLLFNFHLNGRTAPLTIIGPQGLAAYLLFHFQLIGLKAQSYSLSLIEVQ
FPKDDTPKGGMDTIQYRNFLTSAYERAFVQISGKIIKIADAYVIKTYWMKHSMPTLGYRY
EEKPHDGKFNPERAKELNIRPGILWKRMQKGETIKINGDTEINPILEGIVTEKRPGYIVA
YSGDTMMCPNLVTLAKNADYFICESTYIIEDEKLAIEKLHMSTKMAATVARDANVGHLFL
VHFSGRYRDVMILEEEARRFFQDTTAAVDLMNIEIKPKK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaatttcttggaaccagcggggcgactcccacgatggatcgaaatctacct
gctatagcaatgagacttgacagtggtgaaataatcttatttgatgctggagaagatgtt
caaagacggtttgaagccgcaaaattaaaatttaatgtacccacaactattttgatctcc
catctgcatggtgatcatgttattggattgcctgggttattatttaattttcatcttaat
ggtcgaactgctcctttgaccatcattggaccgcaaggccttgcagcttatttactattt
cattttcaattaatcggtctaaaagcgcaatcttattctctttcgctaatagaagttcag
tttccaaaagatgatacacctaaaggggggatggacactattcaataccggaatttctta
acatctgcatatgagcgagcctttgtccaaatttcaggaaaaatcattaaaattgcagat
gcatatgtaattaaaacgtattggatgaaacatagtatgcctacattgggatataggtat
gaagaaaagccacatgatggaaaatttaatcctgaacgggccaaagaattaaatattcga
cctgggattctatggaagcgaatgcaaaaaggtgaaacgatcaaaattaatggagacact
gaaatcaatcctattttggaaggtatcgtcactgaaaaacgacctggatatatcgtggca
tatagtggtgatacaatgatgtgtcccaatttggtgactcttgctaaaaatgcagattat
ttcatttgcgaatctacctatatcattgaagatgaaaaattggccattgaaaaacttcat
atgtcaacgaaaatggctgcaacagttgctcgggatgctaatgtgggtcatttattttta
gttcatttttcggggcgttatcgcgatgttatgatccttgaagaagaagctagaagattc
tttcaagatacaactgcagctgtggatttgatgaatatagaaataaaaccaaagaaatag
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