Candidatus Lokiarchaeum ossiferum: NEF87_001309
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Entry
NEF87_001309 CDS
T09593
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NEF87_001309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_001309
Enzymes [BR:
lob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NEF87_001309
Transcription machinery [BR:
lob03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NEF87_001309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
UYP45024
LinkDB
All DBs
Position
complement(1607537..1608091)
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AA seq
184 aa
AA seq
DB search
MKIPPTKFGGDIKDAAFEILSEQFNGQIFENIGFVIVCIDVLELGNGKLLHGDPSTYHSC
TFTVLCYMPELHEIIEGTVVEVVEFGAFIRLGPSDGLCHVSQICDDFISYENMNQRFIGK
ESNKILTVDDMVRGRIIAVSMGTGRSGKLGLTMRQPFLGKIEWIAEEIEGEGGEIVDDNL
EVED
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatccctccgactaaatttggtggcgatattaaagatgccgcgtttgaaatcctt
tcagaacaatttaatggacaaatttttgaaaatatcggcttcgttattgtctgtattgat
gttttagaacttgggaacggaaaattgcttcacggtgaccctagtacatatcattcttgt
acatttactgttctctgttatatgcctgaattgcatgaaataattgaaggaacagttgtg
gaagtcgtagaattcggggcttttattcgcttaggtccttcagatgggttatgtcatgtc
tctcaaatttgcgatgattttatttcctatgaaaatatgaatcagcgttttataggaaag
gaatccaacaagattttgaccgtcgatgatatggttcgaggccgaattattgcagtctca
atgggaactgggcgatctggaaaattaggtttaaccatgcgtcaaccatttcttgggaaa
attgaatggattgctgaagaaattgaaggcgaaggcggggaaatcgtggatgataacctc
gaagtggaagattag
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