Candidatus Lokiarchaeum ossiferum: NEF87_001342
Help
Entry
NEF87_001342 CDS
T09593
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEF87_001342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_001342
Transcription machinery [BR:
lob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NEF87_001342
Prokaryotic type
Archaeal type
TFB
NEF87_001342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UYP45057
LinkDB
All DBs
Position
complement(1643508..1644359)
Genome browser
AA seq
283 aa
AA seq
DB search
MGEILTISNYHPNDSSASIDFETHSHNFITDMPSGQIVCNLCGLVKETNIIVSSWDGVPY
SDETTISISKKSLMNINPNLKRALKLNRNKSWDDRKLTIGINEIKRLCARFGLGEYIVTR
SIYLFQKAIQCPNFKIHNVILTSQVCFFYSAKLNKHPLSIEEVIEDHNFSSRLAYRYYYL
LMSQLHLVKPESNPAPLIPKLCASLGLDEFVVQQANLILSIYLKHENTSGLNSVGIVAGV
IYFACLRERIPRSQQIIAQYAKISDITLRTRYKEIKKICGRHM
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaattttaaccatctcaaactatcatcccaatgatagttctgcatcgatcgat
tttgagacacattctcacaattttattactgatatgccttctgggcaaattgtatgcaat
ctgtgtggtcttgtaaaagaaactaacataattgtttccagttgggatggagtgccatat
tctgatgaaactaccatttcgatctctaaaaaatcactcatgaatattaacccaaaccta
aaacgggctttgaagttaaatcggaataaaagttgggatgatcgaaagctaaccattgga
attaatgaaattaaacgactttgcgctcgttttggattgggggaatacattgttactcgt
agtatttatcttttccaaaaagcaatccaatgcccgaattttaaaattcataatgtaatt
ctcacttcacaagtctgtttcttttattcagcaaaactgaataaacatcctttatccata
gaagaagtaattgaagatcataacttttcttctcgactcgcatatcgatattattactta
ttaatgagccaattacaccttgttaaaccagaaagtaatcccgctccattaattccaaaa
ctttgtgcgagtttaggtcttgatgaatttgttgttcaacaagctaatttgattttatca
atttatcttaaacatgaaaatacaagtggcctaaattcggtaggtattgttgcaggtgtg
atttattttgcttgtttacgcgaacgaattcctcgcagtcaacagattattgctcaatat
gcgaaaatttcagatattactttaagaacgcgttacaaagaaatcaaaaaaatttgtggg
cgccacatgtaa
DBGET
integrated database retrieval system
