KEGG   Candidatus Lokiarchaeum ossiferum: NEF87_001556
Entry
NEF87_001556      CDS       T09593                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
lob  Candidatus Lokiarchaeum ossiferum
Pathway
lob03030  DNA replication
lob03410  Base excision repair
lob03420  Nucleotide excision repair
lob03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NEF87_001556
   03410 Base excision repair
    NEF87_001556
   03420 Nucleotide excision repair
    NEF87_001556
   03430 Mismatch repair
    NEF87_001556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lob03032]
    NEF87_001556
   03400 DNA repair and recombination proteins [BR:lob03400]
    NEF87_001556
DNA replication proteins [BR:lob03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NEF87_001556
DNA repair and recombination proteins [BR:lob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NEF87_001556
   MMR (mismatch excision repair)
    Other MMR factors
     NEF87_001556
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    NEF87_001556
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: UYP45271
LinkDB
Position
complement(1896826..1897611)
AA seq 261 aa
MFKAKIKDARIVKGMFEAVSAIISETLLKVDPDKGITLTAMDLSHICLVSLSLVKEDLDE
FEADQNYELGINLEDLVKIIKRSGSNDEISFIHDPKDKKLIIEMKPESAKKARKFTISLI
DIEGEEINLESLEAMEFDNKVRMGLKNLDEAIKDAEIFAEVLQVQAKENLIFSTTGNIGD
MEYVLEKEELESSEFSAESTGIFAISFLKNILKVSAIADKVEMELKSEAPLKMVFDILNS
SRIMYFLAPRVEEDDDSMYED
NT seq 786 nt   +upstreamnt  +downstreamnt
atgtttaaagctaaaataaaagatgcccggattgtgaaaggaatgtttgaagcagtctct
gccatcattagtgagactctcttaaaggtagatccagataaaggaattacattaactgcg
atggatttatcccatatttgtcttgtatcattatccctagttaaagaagatttagatgaa
tttgaagcggatcaaaattatgaattggggattaatctcgaggatttagtaaagattatc
aaaaggagtggaagcaatgatgaaatttcctttattcatgatcctaaggataaaaaatta
atcattgaaatgaaacctgaatccgctaaaaaagcacgcaaatttaccatatctctcatc
gatattgaaggagaagaaattaatttggaatctctagaagccatggaatttgacaataaa
gttcggatggggcttaaaaatcttgatgaagctatcaaagatgctgaaatttttgcagaa
gtgttgcaagttcaagccaaagagaatcttattttctcaaccactggaaatattggcgat
atggaatatgttcttgagaaggaagaattagaatcttctgaattttcggccgagagcacg
gggatttttgcgatttcctttttgaaaaatattttaaaggtatctgcaattgcggataag
gtcgaaatggagctcaagtctgaggctccgttaaaaatggtttttgatatccttaattcc
agtcgaatcatgtatttcctcgctccacgtgtagaagaagatgatgattcgatgtatgag
gattag

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