Candidatus Lokiarchaeum ossiferum: NEF87_001572
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Entry
NEF87_001572 CDS
T09593
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NEF87_001572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_001572
Enzymes [BR:
lob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NEF87_001572
Transcription machinery [BR:
lob03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NEF87_001572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Secretin_N
Motif
Other DBs
NCBI-ProteinID:
UYP45287
UniProt:
A0ABY6HP60
LinkDB
All DBs
Position
complement(1909808..1911058)
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AA seq
416 aa
AA seq
DB search
MAKKKAKTSTKKADKLDPRLQDGLDFLRSHGLNDFYLDKVQEHVITEGFQGDEIDYFIKE
IYTNYKRALVVPGEPVGTVAAQSIGEPGTQMTLRTFHYAGVSDFSVTQGLPRLIEIVDAR
RNPSTPIMTIYLDEKHRHDVKKAREVHSQIEQIKFETITSEIEIDLTEYSLNLSFIDDLL
EDKNITIDDIMKKLKKFKKKGTIEYDEEMNMVIINPETEDLQKLQKLREKIVKTLIRGVR
GINRGMIKKDEDEWVIQTEGTNLGDVLTKIDGVDATRTFSNHIHEIEKHLGIEASRQTII
QEAVSVLEDQSLDVNIRHLNSMADLMCVSGQIQQIGRHGISGTKESVLARAAFEVTIKQL
INASISGEEEKLMGIPENVIVGQLVPTIGTGSIELTMDFAETMRLLQNRKAEEIED
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaaagcaaaaaccagtacaaaaaaagcggacaaactcgatcctcgatta
caagatgggctagattttcttcgatcccatggtctaaatgatttttatcttgataaagtt
caagaacatgtcatcactgaaggatttcaaggtgatgaaattgattattttatcaaagag
atttatacgaattataaacgtgctttagtcgttcctggagaacctgttggaactgttgca
gctcaatctatcggggagcctggaactcagatgacacttcgaacgttccattatgcaggg
gtgtctgattttagtgttactcaaggattacctcgattgatcgaaattgttgatgctcgt
agaaatccaagtaccccaattatgaccatctatttagatgaaaaacatcgtcatgatgtg
aaaaaggctagagaagtccattctcagattgaacaaatcaagtttgaaactattaccagt
gaaattgaaattgatttaaccgaatattctctaaatttgtcattcattgatgatttgtta
gaagataagaatataactattgatgatattatgaaaaaattgaagaaattcaagaagaaa
gggaccatcgaatatgatgaagaaatgaatatggtcataatcaaccctgaaacggaagat
cttcaaaaattgcaaaaattacgggaaaagatcgtcaagacattaattcgtggagttcgt
ggaataaaccgtggaatgattaagaaagatgaagatgaatgggttattcaaaccgaaggc
actaatttgggtgatgtactgaccaaaattgatggagtagatgcaacccgcactttttct
aatcatattcatgaaatagagaaacatctcggaattgaagcatctcgccagaccatcatt
caagaagcagtatcagtgttagaagatcaatctcttgatgtgaacattcgccatttgaat
agtatggctgatttaatgtgtgtttctggacaaattcaacaaattgggcgccatggtatt
agtggaaccaaagaatccgtgttagctcgagccgccttcgaagtaacaattaaacaactt
attaacgcatccattagtggagaagaagaaaaattaatgggtattccagagaatgtaatt
gtggggcaactcgttcctacaattggaactggatctattgaattaaccatggattttgca
gaaaccatgcgtttacttcaaaatcgaaaagctgaagagatcgaagattaa
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