Candidatus Lokiarchaeum ossiferum: NEF87_001787
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Entry
NEF87_001787 CDS
T09593
Name
(GenBank) Vitamin B12 import ATP-binding protein BtuD
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NEF87_001787
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lob02000
]
NEF87_001787
Transporters [BR:
lob02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NEF87_001787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_15
AAA_10
TAGT
DUF4175
Motif
Other DBs
NCBI-ProteinID:
UYP45502
LinkDB
All DBs
Position
2166180..2168420
Genome browser
AA seq
746 aa
AA seq
DB search
MKKILKYAKPHIPLILVAIVLLFGQANADLALPDYLSKIVNTGIQQGGVEDPAPIAISNS
TMERCKLFMNETEKDLVLSKYTAITNISNEYEDYLEDYPLLENESVFIQNKLKSSELDEL
NPIMAKTIMTVSIIENLLNNASLAGNITFGLGFNVSAIPEGMDVFTILGNLPQANRTEIV
DMVTSEFNAIGEMVLFQAAINSVRQEYTKLGMDTDQIQTRYVIIAGVWMLLLTLASVTCT
ISVALIASRTAATMGKEIRHDLFERVESFASAEFDQFSTSSLITRTTNDITQVQMVTVLV
IRMVFYAPIMGIGGVIRAQGKAPSLSWIIGLAVLVLICVIITVFIISVPKFKINQKLIDR
LNLVARENLSGMMVIRAFNMQEFEENRFDKANVDLTAVSLFINRVMVVLMPVMMLVMNGL
VIAIIWQGAHEVADFNMQVGDMMAFMQYAMQIVMSFLMLTMLFIFLPRSSVSIGRIEEVL
KTKPTIIDKETPEELPSPLEGVIEFRDVSFKYPGAEQEVLQNISFTAKPGETTAFIGSTG
SGKSTVVNLIPRFYDVTSGKILVDRKNIRDVDQHALRDNIGYVPQKSLLFSGTIESNLRY
ADENASTETIQIAIEVAQAKEFVSSKPEGIASTISQGGSNVSGGQKQRLSIARALVKGSQ
ILILDDSVSALDFKTDAALRRALKETTKNTTLLIVTQRISTVMNAEQIIVMDEGRIVGKG
THKDLLKTCSTYQEIAQSQLALEELA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcttgaaatacgcgaaaccccacatccccttgatattggtggccattgtt
cttctatttggacaagctaatgcagatttagcattgccagactatctttccaaaatagtg
aacactggaattcaacaaggaggtgtggaggacccagcaccgatcgccattagcaacagt
acaatggaacgttgcaaattatttatgaatgaaacagaaaaggatctggttcttagtaaa
tataccgcaataacaaatatttcaaacgagtatgaggattatcttgaagattatccctta
ctggaaaatgagtcagtttttattcaaaataaactgaaatcctcagaattagatgaatta
aacccaattatggcgaaaactattatgactgtttcgataattgagaatttattaaacaat
gcgagcctcgcaggtaacattacttttggattaggattcaatgtttctgcaataccggag
ggaatggatgttttcacaatcttgggtaatttacctcaggcgaatagaacagaaattgtc
gacatggtcacatctgaatttaatgcgattggagaaatggttttattccaagcagccatt
aattctgttcgtcaagaatatactaaattgggaatggatacagatcaaattcaaacaaga
tatgttatcatagcaggagtatggatgttattattaacattagcttctgtgacatgtacc
atttcagtagcattgatagcatccagaacggctgctactatgggtaaagagattcggcat
gatttatttgaaagagtagaatcatttgcaagtgcagaatttgatcagttttccacttct
tccttaattacgcgaacaaccaatgatataacccaagtccaaatggtcacagtattggta
atccgaatggtcttttatgcacccattatgggaatcggaggtgtaattcgagcccaaggc
aaagccccatcactctcatggatcattggtttagctgtgttagtattgatatgtgtaatt
ataacagtatttattatttcggtaccgaaatttaaaattaatcaaaaattgattgatcga
cttaatctggtagcacgggaaaatctctcgggtatgatggtaattcgtgcatttaacatg
caggagtttgaagaaaaccgttttgacaaggcaaatgtagatttaacagcagttagtttg
tttatcaaccgtgtgatggtagttttaatgcctgtaatgatgctcgtaatgaatggatta
gtaattgcaattatttggcaaggagctcatgaagtcgcagattttaatatgcaagtggga
gatatgatggctttcatgcaatacgcaatgcaaatagttatgtccttcttaatgcttaca
atgttatttatcttcttacctcgatcatctgtctctattgggcgcattgaagaagttttg
aaaactaaaccgacaattattgacaaagaaactccagaagaactcccctctccattagaa
ggagttattgaatttcgagatgtttcatttaaatatcctggagcagaacaagaagtattg
caaaatatttcatttaccgcaaaaccaggggaaactaccgcatttatcggatcaactggt
tctggaaaatcgaccgttgtgaatttaattccccgcttttatgatgttacctcgggaaaa
attttagtggatcgcaaaaatattcgggatgtggatcaacatgctttacgtgataatatc
gggtatgtgcctcaaaaaagtctcctcttttcggggacgattgaatcgaacttgcgttat
gctgacgaaaatgcgagcacagaaacaattcaaatagcaattgaagttgctcaagcaaaa
gaatttgtctcatctaaacccgagggaattgcaagtacaatttcacaaggtggttcaaat
gtatccggtgggcaaaaacagagattgtccattgcgcgtgctttagttaaaggatctcaa
atattgatcttagatgatagtgtttccgcactggatttcaaaaccgatgcagccctccgc
agagctttgaaagagacaactaagaataccaccctcctaatagttactcaacggatttct
acagtgatgaatgcagaacagataattgtaatggatgaagggcggattgttggaaaagga
acacataaagatcttctaaagacgtgtagcacatatcaagaaattgcgcaatctcaatta
gccttggaggaattagcatga
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