Candidatus Lokiarchaeum ossiferum: NEF87_002140
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Entry
NEF87_002140 CDS
T09593
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lob03016
]
NEF87_002140
Enzymes [BR:
lob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NEF87_002140
Transfer RNA biogenesis [BR:
lob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEF87_002140
Prokaryotic type
NEF87_002140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UYP45855
UniProt:
A0ABY6HQQ7
LinkDB
All DBs
Position
complement(2563099..2564118)
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AA seq
339 aa
AA seq
DB search
MSFEYLLPYESVPHKYVVKSEEPTDPQYGFEPLKRPLAYYIDCGMVNLDKPSGPTSHEVA
SWVKKVLGLEKTGHGGTLDPHVTGILPVALGPATKVVKALLSAGKEYICLMYLHEEIPEE
KIRNVLNIFTAQLYQRPPLKSSVARRLRMRTIYYTQLLEVKNQFALFRVGCEAGTYIRKL
CFDIGEALLCGAHMAELRRSRTAEFREDDTLCTLQDLNDAIKIYREEKDASYLRKLISPM
EKAVQHWKKIYIRDSAVDAIAHGAGLAVAGVLYLEKSIERHESVAIMTQKGELVAFGESL
LSTSAILKNDHGICAKPTRVFMKRGLYPHWNKEAKVITP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttgagtatcttctcccctatgaatcagttcctcacaaatacgtggtaaaaagt
gaagagcccacggatccgcagtatggctttgaaccattgaaacggcctttggcgtattac
atagactgtggtatggtaaatttagataaaccttcgggtcccacttcccatgaagtcgct
tcttgggttaaaaaagttcttggtctcgaaaaaacaggtcatggtgggactctggatcct
catgttactgggatccttccagtggctttggggccagcaactaaagttgtgaaagcactg
ttgagcgcaggaaaagaatatatttgcttaatgtatcttcatgaggaaattcctgaagaa
aaaattagaaatgttttaaatatttttactgcacaattgtatcaacgtcctcctcttaaa
tcatccgttgctcgtagattgcggatgcggactatttattatactcaattacttgaagtg
aagaaccaatttgcactttttcgtgttggatgtgaagctggaacctatatacgaaaactc
tgttttgacattggggaagctttattatgtggagcccatatggcagaattgcgaagatct
cgaaccgccgaatttcgggaagatgatactctttgtactctccaagatctaaacgatgca
ataaagatttatcgggaagaaaaagatgcttcctatttacgtaagctcatatcacctatg
gaaaaagcagtccaacattggaagaagatctacattcgagattcagcagtagatgctatt
gctcatggggcgggtcttgctgttgcgggggtactctatttggaaaaatcgatcgagcgc
catgaatctgttgcgataatgactcagaaaggtgaattggttgctttcggggaatcactg
ctttctactagtgccatcttgaaaaatgatcatggtatttgtgcaaaacccactcgagtc
ttcatgaaacgaggtttatatcctcattggaataaagaagcgaaagtaattaccccttaa
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