Candidatus Lokiarchaeum ossiferum: NEF87_002253
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Entry
NEF87_002253 CDS
T09593
Name
(GenBank) Ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEF87_002253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lob03032
]
NEF87_002253
Enzymes [BR:
lob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
NEF87_002253
DNA replication proteins [BR:
lob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
NEF87_002253
Elongation factors (archaeal)
NEF87_002253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF2848
Motif
Other DBs
NCBI-ProteinID:
UYP45968
LinkDB
All DBs
Position
complement(2685143..2685820)
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AA seq
225 aa
AA seq
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MLIAGLDEAGRGPVIGPLVIGCAIIAHDKLDILEEIGVDDSKKLSPKKRASMAQKIKEVV
DFWDVLVISPTEINHLHDEQKLTLNQIEETNFAKLLNNVKNKPDEIFLDACDVKEDRFGR
TIGSMLQFSPQKIISKHKGDSIFKVVGAASILAKYERDLILASYTEKYGRVGSGYPSDPY
TKKFLDEYYQQHKNFPPIVRTWWKTAENIVNKYNIKKKQTKLTDF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgttaattgctggattagatgaagccgggcggggacctgttattggacctctcgtaatt
ggatgtgccattattgctcatgataaactggacattcttgaagagatcggtgttgatgac
tcaaagaaactttctccgaaaaaaagagcgtccatggcccaaaagatcaaagaagttgtt
gatttttgggatgtattagttatttcaccaacagaaatcaaccacctacatgacgaacaa
aaattaacattgaaccaaattgaagaaaccaattttgctaagctattaaataacgtgaag
aacaaacccgatgaaatatttcttgatgcgtgcgatgtcaaagaagatcgatttggcaga
acaatcgggtcaatgttgcaattttctccacaaaagatcatttctaaacataaaggggat
tcaatattcaaggtggtgggtgctgcttcaattctggctaaatatgagcgagatttgata
ttggcatcctatactgaaaaatatggacgggtgggaagtggttatccctctgatccctat
acaaaaaaattcttagatgaatactatcaacaacataaaaatttccctccgatcgtccgt
acctggtggaagacggctgaaaatattgtgaataaatataatataaagaaaaaacaaaca
aaactaacagatttctaa
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