Candidatus Lokiarchaeum ossiferum: NEF87_002254
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Entry
NEF87_002254 CDS
T09593
Name
(GenBank) hypothetical protein
KO
K07728
putative transcriptional regulator
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lob03000
]
NEF87_002254
Transcription factors [BR:
lob03000
]
Prokaryotic type
Helix-turn-helix
Other families
NEF87_002254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
HTH_26
Motif
Other DBs
NCBI-ProteinID:
UYP45969
LinkDB
All DBs
Position
complement(2685891..2686955)
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AA seq
354 aa
AA seq
DB search
MISHQDIYSNSMGFLKEAGYDVFVNIYSGMEMCFEIIARHKSKSEYAPNLLIKIIENIDS
IKPHIVNEIKLVSRLMAAIPLLIAVKNRHTLLEDDSIYIRKDLIAINLYTFHKIIQSPQI
PMALAFAKKGGLFFDVNGEKLSDLRKKHNLSRKSLAEKIDLSPKAISQYELKNMRTSIDH
ANKMELLFGESVIEPLDFFKFLKNSMRAFKLDSALQKRISSKTREFMGEINEIVNDAGYQ
VFWPRTSPFDLFVYQEDEEGRDIADYTFVGGTQCDRIFASPRHEAQKEFIQHVPRQNSSG
VVYDENIYDEEIAKQNAVPYILPKEFKELEHPDQFKKLIKKRRNSTQKSQDHSL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacatcaagatatatattcgaattctatgggctttcttaaggaagctgggtat
gatgtatttgtgaacatctattcgggtatggagatgtgttttgagatcatagcacgccat
aaatctaagtcagaatatgctcccaatctgttaattaaaattattgaaaatatcgacagt
ataaaaccccatattgtgaatgaaataaagttagtaagtcgtctaatggctgcgatcccc
ttgctaattgctgtcaaaaatcgccacacgttgctagaagatgatagtatttatataaga
aaagacttaattgcgattaatttatatacctttcataaaatcattcaatctcctcaaatt
cctatggcattagcttttgcaaagaaaggaggtttattttttgacgttaatggtgagaaa
ctttctgatttacgaaaaaaacataatctttctcgaaaatccttagcagaaaaaattgat
ctttctccaaaagcaatttcacaatatgaattaaagaatatgcgcacttctattgaccat
gctaacaaaatggaattattatttggagaatcggtcatagaacccctcgatttttttaag
ttcttaaagaattcgatgcgtgcttttaaactggattctgctttgcaaaagcggatttct
tccaaaactcgggaatttatgggagaaattaatgaaattgtaaatgacgcagggtatcaa
gttttttggcctcgcacatcaccctttgatctttttgtatatcaagaagacgaagaaggc
agagatatcgctgattatacttttgttggaggaacgcagtgtgacagaatttttgccagc
ccacgccatgaagctcaaaaagaattcatccagcacgttccccgacaaaattctagtgga
gttgtttatgatgaaaacatctatgatgaagaaattgccaagcaaaatgctgttccctac
attttacccaaagagttcaaagaattggaacatcctgatcaatttaagaaactgatcaag
aaacgtaggaacagtacccaaaaatctcaagaccattcattatag
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