Candidatus Lokiarchaeum ossiferum: NEF87_002283
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Entry
NEF87_002283 CDS
T09593
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEF87_002283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_002283
Transcription machinery [BR:
lob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NEF87_002283
Prokaryotic type
Archaeal type
TFB
NEF87_002283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
RB_B
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_ribbon_RRN7
ORC6_2nd
Herpes_gQ2
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
UYP45998
UniProt:
A0ABY6HR68
LinkDB
All DBs
Position
complement(2713626..2714534)
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AA seq
302 aa
AA seq
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MSYRRNMFKDQDDDDEPCCPSPDVIVNDDGTRVCQNCGLTFGQAFVDSERRAYTSEEVQS
RRRTEPKWRSFGPRTVITGVQADARGHQLGAKKQALFSRLSKIQGSLVSSLERNFWEAKP
KLNALSLKLNIPAQIQETAWKIYTEVARQKLTMGRSIDGFVTASMYAAIRIHEFPRLLEE
IVEVAIIPLRSVHRSLGLIVRNVFPILKMKYKPVTTKSLVYRFGNELKLSMSTQTEAAGM
LDKSRKAGLKSMGKDPKGLAAAALYMACKNSNEKRTQAQIADVARITEVTLRTRVKQIKS
YL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcgaagaaatatgtttaaagatcaagacgacgatgatgaaccttgttgtcca
agccctgatgtcattgttaatgatgatggtactcgggtctgccaaaattgtggtttaact
tttggacaagcatttgttgattctgaacgtcgggcttatacctccgaagaagtacaatct
cgtcgccgtactgaaccaaaatggcgctctttcggaccacgtacagtaattactggtgtt
caagctgatgctcgaggccatcaacttggagctaaaaaacaagctttgtttagtcgtctt
agtaaaattcaaggatctctcgtttcgagtctggaacggaacttctgggaagctaagcca
aaattaaatgccttaagtttgaaactaaatatccccgctcaaatccaagaaactgcctgg
aaaatctatactgaagttgcccgacaaaaacttaccatgggtcgctccattgatggtttt
gtgactgcctccatgtatgctgccattcgaattcatgaatttccacgattattagaagaa
atcgttgaagtggctatcattccattacgaagtgtccatcgatctttaggattaattgtt
aggaatgtattcccaattttgaaaatgaaatacaaacctgtcacaacaaaatcactggta
tatcgatttggtaatgagctaaaactttcgatgtctactcaaacggaagcagcaggtatg
ttggacaaaagtcgaaaagcaggtttaaaatcaatgggtaaggatcctaagggattagct
gctgctgcattatacatggcatgtaagaattcaaacgaaaaacgtacacaagcccaaatc
gccgatgtggcgcgaatcactgaagttactttgcgaactcgggtaaaacaaattaaatct
tatctataa
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