Candidatus Lokiarchaeum ossiferum: NEF87_002465
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Entry
NEF87_002465 CDS
T09593
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEF87_002465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_002465
Transcription machinery [BR:
lob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NEF87_002465
Prokaryotic type
Archaeal type
TFB
NEF87_002465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
PucR-like_N
PknG_rubred
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
UYP46180
UniProt:
A0ABY6HRP3
LinkDB
All DBs
Position
complement(2925442..2926344)
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AA seq
300 aa
AA seq
DB search
MAIPRFYEKDYEDEQCCPTPEILVNNEGMRVCTNCGLVLGRAYVSAEKRAYTADEVKNRR
RTEPRWRNYGPRTVIGVNSSDSKGQALVGKQKSMFNRLSKIQGSLVNSLERNFWEARPKI
NQLAKKLNIPDHILETAWKIYSEVAKQKLTMGRSIDSFVAASTYAAIRIHNFPRLLEEIV
DVAMLPLRGVHRSLGLVVRNVLPVLNMKYRPVSPEPLVFRFGNDLNISVSIQKKASDLLR
LALKHGLQKMGKDPKGLAAAALYLAAKPTVERKTQTEIADTARITEVTLRTRAKQIKSSL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccattccaagattttatgaaaaagattatgaagatgaacaatgctgccctactcct
gaaatacttgtcaataatgaaggtatgcgtgtgtgcactaactgtggtttagttttagga
cgtgcttatgtttctgctgaaaaacgggcttatacagccgatgaagttaaaaatcgtcgg
cgaaccgaacctcgttggagaaattatggtccacgaacagtaattggtgtgaatagttct
gattccaaaggacaagctttagtcgggaagcagaaatcaatgttcaacaggctctccaaa
attcaaggatcgttagtaaattcccttgaacgaaatttctgggaagcacgaccaaaaatt
aatcaattagctaaaaagcttaatattcccgatcatatcttagaaactgcgtggaagatc
tactctgaagtcgccaaacaaaaattaacaatgggacggtcaatagattcttttgttgct
gcttctacttatgccgcaattcgaattcataactttccacgtttattagaagaaattgtg
gatgttgcaatgcttcctttaagaggggttcacagatcattaggtttagttgtacggaat
gtgcttccagttctgaatatgaaatatcgaccagtttccccagaaccccttgtattccga
tttggaaatgatcttaatatttccgtaagtattcaaaaaaaggcttcagatttacttcgc
ttagcacttaaacatggccttcaaaagatgggaaaagaccctaaaggattggcggcagca
gcattgtatctggccgctaaaccaacagttgaacgaaaaacacagactgaaattgccgat
actgcgcgaataactgaagtaactttacgaactcgagcaaaacagatcaaatcatccttg
tag
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