Candidatus Lokiarchaeum ossiferum: NEF87_002479
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Entry
NEF87_002479 CDS
T09593
Name
(GenBank) Phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NEF87_002479
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lob01007
]
NEF87_002479
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lob03016
]
NEF87_002479
Enzymes [BR:
lob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
NEF87_002479
Amino acid related enzymes [BR:
lob01007
]
Aminoacyl-tRNA synthetase
Class II (U)
NEF87_002479
Transfer RNA biogenesis [BR:
lob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NEF87_002479
Prokaryotic type
NEF87_002479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B5
B3_4
PhetRS_B1
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UYP46194
LinkDB
All DBs
Position
complement(2940995..2942686)
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AA seq
563 aa
AA seq
DB search
MPTIELKISQLSELLDKELTYETLQYDLQWISLDIDDYDPEEGIIKVEFNPNRPDFSSPE
GVARVLAGYYGLAKGLQEYHVKKGLEYFKVDAKVRKVRPFVVSGLVRFAEPLNETQVITL
MRMQEILHWAVGRDRKKVAIGIHDYDTVKGPYLYTTVKPDGVKFKALHLEAYELTPQEIL
EEHPMGIQYAHLLEGFNEYPMIYDAEGKVVSFPPVINGTYTTVTPDKTKNLLLDLTGTSK
KAVDVALNILASTFADMGGEVESVKVIYEDEPDNAMYTPDLTPKHWQARVDYINSYIGLH
LSPQEMMECLEKMRLDAKIVDSNTIDVAIPAYRDDIMHEVDIVEEVAMGYGYQNLDLTIN
MEGLGKYHPVLVNEQKTRDIMVGTGCIEMSNNILISKNDNLSLRLPMKKSDEIILENPVS
LEYNTVRRSLLVSLMKNLQFNRSGEKPFRLFEVGDVILLDKQEQSQTRRESHLACVLHSE
GSDYSEIKSVLDHYLRTLGVLQAIKIVPAENPTFIPGRTGEIHYKDHIIGYIGEIHPEVI
LNFGLEYPTAGFEINLTSFITDE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgatagaattaaaaatttcccagctatcagaattgttggataaggaattaact
tatgaaacactccaatatgatttacaatggatatccttggatattgatgattatgatcct
gaagaagggataattaaggtagaattcaatcccaatcgtcccgatttttcaagtcctgaa
ggggtcgcgcgcgttcttgcgggatattatggtcttgcaaaagggttacaagaatatcat
gtcaagaaggggttggaatatttcaaggtagatgccaaagtacggaaagttcgtccgttt
gtggtgtccggattagttcgctttgcagaacctcttaatgaaacccaggtcattactctc
atgcgaatgcaagaaatcttgcattgggctgtaggaagggatcggaagaaggttgcaata
ggtattcatgattatgatactgtcaaagggccttatctttacaccactgtgaagcctgat
ggtgttaaatttaaagctcttcacttggaagcctatgaattaacccctcaggaaattttg
gaggaacatccgatgggaattcagtatgcccacttattagaaggttttaatgaatatcct
atgatctatgatgctgaaggaaaagtagtatcttttcctcctgtgataaatgggacatat
accacagttacacctgataaaactaaaaatctactcttagatcttactggaacaagtaaa
aaagctgtggatgtagcgttaaatattttagcttcaacctttgctgatatgggaggtgaa
gttgagtccgtgaaagtgatttacgaggatgagcccgataatgcgatgtatactcctgat
ttaactccaaaacactggcaagctcgagttgattacattaattcttatattggattacat
ctctccccccaagaaatgatggaatgcttagaaaaaatgcgattggatgccaaaattgtt
gattccaacacgattgatgtcgctattcctgcctatcgggatgatatcatgcatgaagtg
gatatcgtcgaagaagttgctatgggctacgggtatcaaaatttagatctgacaattaat
atggaagggttaggtaagtatcatcctgtattggtaaatgaacagaagacacgagatatt
atggtaggtacgggttgtatcgaaatgtccaataatatcctaatttccaaaaatgataat
ttaagtctccgcttaccaatgaaaaaatcggatgaaattattctggaaaatcctgtttcc
cttgaatataacacggttcggcgaagtctactggtgagtttgatgaaaaacttacaattc
aaccgatctggggaaaaacctttccgcctatttgaagtaggagacgtcattctactggat
aaacaggagcaatctcaaacccgtcgggaatctcatcttgcttgcgtcctacattctgaa
ggaagtgattattctgaaatcaaatccgttttagatcactatttaagaactttaggggta
ttacaagccataaaaatagtgccagcggaaaatccgactttcattcccgggcgaacaggc
gaaattcattataaagatcacattattggatatatcggtgaaattcatcctgaagtcatt
ttaaatttcggattagagtatccaacagctggatttgaaattaacttgacatcctttata
actgatgagtga
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