Candidatus Lokiarchaeum ossiferum: NEF87_002552
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Entry
NEF87_002552 CDS
T09593
Name
(GenBank) Ribosome maturation protein SDO1
KO
K14574
ribosome maturation protein SDO1
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NEF87_002552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lob03009
]
NEF87_002552
Ribosome biogenesis [BR:
lob03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
NEF87_002552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_domain_II
SBDS_C
SBDS_N
Motif
Other DBs
NCBI-ProteinID:
UYP46267
UniProt:
A0ABY6HV81
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All DBs
Position
complement(3024767..3025561)
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AA seq
264 aa
AA seq
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MSQNRGSPKGNFDLGKYIIVKLRKGKTNFEMVSDPEEAWKAKKILAEYRKKENQDQALTR
EDLLHHPDLDLTNIFPTYDIFTNVKKADRCTSEDLQEAFETTNEREVAAEFVLDGEFLWT
QAQRQKWVEKKKKQIITILARNCVNPQSKKPHPPKRIEKAMEEARVSIDLDKTAEEQIET
ILKKIQLIIPIRMESVEMAVKIPAIYAAKAYNTVEKYAQVKKSEWQTDGSWVGMVSLPAG
LQMEMLEKLNKLTHGRMQSKLLQN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcaaaaccgtggtagtccaaaggggaattttgatctagggaaatatattattgta
aaattacggaaaggcaaaactaattttgaaatggtgagcgatccagaagaagcgtggaaa
gccaaaaagattttagccgaataccgcaaaaaagaaaatcaagatcaggctctcactcgg
gaggatcttttacatcaccctgatctggatctaacaaatatttttcccacttatgatatc
ttcacaaatgtaaaaaaagccgatcgatgtacttcagaagatttgcaagaagcatttgag
acaacgaatgaacgcgaagtcgcagcggaatttgttttggatggggaatttttgtggacc
caagcacaacgtcagaaatgggtagagaaaaagaaaaaacaaattataactatccttgct
cggaattgtgtgaatccacaaagcaaaaaaccacatcctcccaaacgtattgaaaaagct
atggaagaagcacgtgtgtccattgatttagacaaaactgcggaagagcaaattgaaaca
atcttaaagaaaattcaattaattattcctattcgcatggaatcggttgaaatggcggtt
aaaattccggcaatatatgcagctaaagcgtataataccgttgaaaaatatgcccaagtg
aaaaaatctgaatggcaaactgatgggtcgtgggttgggatggtctctcttcctgcagga
ctccagatggaaatgcttgagaaattgaacaaattaacccatggacgaatgcaaagcaaa
ttgcttcagaactag
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