Candidatus Lokiarchaeum ossiferum: NEF87_002588
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Entry
NEF87_002588 CDS
T09593
Name
(GenBank) Endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NEF87_002588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lob03400
]
NEF87_002588
DNA repair and recombination proteins [BR:
lob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NEF87_002588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Motif
Other DBs
NCBI-ProteinID:
UYP46303
LinkDB
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Position
complement(3062584..3064089)
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AA seq
501 aa
AA seq
DB search
MIGLTQENLDTIGFTFLLNKLDTLTPFGKELKNNLRRFSPSEKELLITELSNIGCLCSSI
QKNSSIHKKIDYILPKLRDIRRSLLNLQETKILDEVEIFELKKFAMDFEDFSSKVQSLHL
SLPEMDFTSFKQVISLLDPNQTNIPTFYLYDSYSDSLQKIRERKRSLETKIFQTQDSELI
KQLKEERLDVVILEREEELNVKKSLSFQLRQYTTLYLDNITKLGLFDFWISKAKLALEFG
GVKPQISSNQGIKIKRSINPYVQSILNQSEKQFTPISIDLDLGVTIITGANMGGKTVSLQ
TLFLNVLLAHYGFFVFAKSVQIPLFDNLYFVSDDMQDVSAGLSTFGAEIITVNQIISSLP
KKFSFIVMDEFARGTNPSEGTILIKALTQYLNSQNAISLITTHYEGISNKKFAHYQVMGL
KNVDFLSLKHKIDLQSSQKYTSIQIIQEHMDYRLERVQHDSIVPKDALNIAILLGLTDNI
VKYAKNQYNQMEKNDQYDNSE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatagggctaactcaagagaatttggatactattggatttacttttcttcttaacaag
ctggatactttaactccctttgggaaagaattgaaaaataatttacggaggttctcccct
tctgaaaaggagcttctaataacagaactttcaaatattggatgtctttgtagttcaatt
caaaaaaatagttcaatccataaaaaaattgactatattcttccaaaattaagagatatc
cgacgatccttattaaatcttcaagaaacgaaaatattggatgaagttgagatttttgaa
ttaaagaaatttgccatggattttgaggatttttcttcgaaagtgcaaagtttgcaccta
tccctacccgaaatggattttacttcctttaaacaagtaatttctttattagatccaaat
cagacaaatattcctactttttatctttatgattcttattctgattcccttcagaaaatt
cgtgaaaggaagagatcacttgaaactaaaatctttcaaacgcaagattcggagttaata
aaacaacttaaggaagaacgattagatgtagtgatattagaacgcgaagaagaacttaat
gttaaaaaatccctttcctttcaacttcggcaatacactaccctatatttggacaatatt
accaaattaggactttttgatttttggatctccaaagcgaaacttgctttagaatttggg
ggggttaaacctcagatttcttcaaatcagggtattaaaattaaaagatctataaatcct
tatgttcaatcgattttaaatcaatcagaaaagcaatttacaccgatatcaattgatctc
gatttgggagtgacgattatcactggcgcaaatatgggaggaaaaacagtttccttgcaa
actctcttcctaaatgtactgcttgctcattatggattttttgtatttgcaaaatctgtt
caaatccccttgtttgataatctatattttgtttctgatgatatgcaagatgtttctgca
ggtttgtccacttttggagctgagataattactgttaatcaaataatttcttctcttccc
aaaaaattttccttcatagtaatggatgaatttgcccgaggaacaaatccgtcagaagga
acaattttaatcaaggctttaacccagtatttaaactcccaaaatgcaatttctcttata
actacacactatgaaggtatttctaataaaaaattcgcacattatcaagtgatgggacta
aaaaatgtcgattttctttccctaaaacacaaaattgaccttcaatcctctcaaaaatat
acatctattcaaattattcaagaacatatggattatcgtttggaacgcgttcaacatgac
agcattgttcctaaggatgctcttaatatagctattttgcttggattaactgataacatt
gtaaaatacgcgaaaaatcaatacaatcaaatggaaaaaaatgatcaatatgacaactca
gaatga
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