Candidatus Lokiarchaeum ossiferum: NEF87_002705
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Entry
NEF87_002705 CDS
T09593
Name
(GenBank) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEF87_002705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_002705
Transcription machinery [BR:
lob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NEF87_002705
Prokaryotic type
Archaeal type
TFB
NEF87_002705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
SF-assemblin
DZR
Glutaminase
Motif
Other DBs
NCBI-ProteinID:
UYP46420
LinkDB
All DBs
Position
3196399..3197421
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AA seq
340 aa
AA seq
DB search
MNNTYKIENYKICPECHGSVIKNLHENVCVECGLIINDLQLMDSYQYNEIKNTDLSAGDQ
FVSIGKTIDNVCTLGSHIGYYSSNSFFDHRNMILPSAQQKKFRKLKKQYSLPIKIKNHET
DYRILGILNRITQYMNLSDNVKNRSAYFYQSIKKKATNIRNHVSLIAFCIYYSSREFSQN
APISIKEICKVFTIMGHRINPKLIIRDSITYKCFIMKNEKINRPHKSEDYINRFVNSIVN
SSEICVRMKKKGISWTKEEYKRKLETKCNSTLKLLDLNVRRARNPFILAGAVIYCADKLI
AKENNTKTILTQKSASNAMEIAEYSIRDHYVKILKPIFFP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatacatataaaattgagaattataaaatctgtcctgaatgtcatggaagtgtt
attaaaaatctccacgagaatgtttgtgtcgaatgtgggttaataataaacgatttacaa
ttgatggatagttaccaatataacgaaataaagaatactgatttatctgcaggagatcaa
ttcgtttcaataggaaagacgatcgacaatgtttgcactttaggtagccatataggatat
tactcaagtaattctttttttgatcacagaaatatgatattaccttctgctcaacaaaaa
aagtttcgtaaattaaaaaaacaatattctttaccgattaaaataaaaaatcatgaaaca
gattatagaatacttggcattttaaacagaataactcagtatatgaatttatcagataat
gttaaaaatcgtagtgcctatttttatcaatccataaaaaaaaaagcaaccaacattaga
aatcatgtatcattaatcgcattttgtatatattattcatctcgagaattttcacagaat
gctccaatcagtattaaagaaatttgtaaggtttttacaattatgggccatagaatcaat
ccaaaattaattattagagatagcatcacctataaatgctttattatgaaaaatgaaaaa
ataaatcgacctcataaaagtgaagactatattaataggtttgtaaattcaatagttaat
tcttctgaaatatgtgttcggatgaagaaaaaagggatttcatggacaaaggaagaatat
aaaagaaaattagaaacaaaatgcaactcaacacttaaattactcgatctgaatgttcga
agagcaagaaatccatttattttagcgggagcagtaatatattgtgctgataaattgatt
gcaaaagaaaataatacaaaaacaattttaacccaaaaatcagcgtcaaatgcaatggaa
atagcagaatattcaattagagatcattacgtgaagattctaaagcccatttttttccct
taa
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