Candidatus Lokiarchaeum ossiferum: NEF87_002888
Help
Entry
NEF87_002888 CDS
T09593
Name
(GenBank) Chromosome partition protein Smc
Organism
lob
Candidatus Lokiarchaeum ossiferum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
ERM_helical
AAA_29
CENP-F_leu_zip
AAA_15
ATG16
DegS
Uds1
Jnk-SapK_ap_N
Crescentin
Motif
Other DBs
NCBI-ProteinID:
UYP46603
LinkDB
All DBs
Position
complement(3397815..3402332)
Genome browser
AA seq
1505 aa
AA seq
DB search
MPKKEEKVTTLTYIKRVTMSGFKSFGNRTVSVSLAKGFTCIIGPNGNGKSNVIDALCFAL
GRMSKKTMRAKSLTDLIFAGSKTKKPATKAEVEITFDNRDKVFPSDASEYSISRWIRKKG
TSGYKIQGKKATRETILNALAQANIDPDGSNQFILQGRIVELTHMNTNKRREFIEELIGL
SKYDRMKEQTLKELEKADKDLGQFEAIFKEVSAQLKKVEKEKNDALRWKELDNLVKLHNA
QLIALKIHNLRQEEEEVEADIESTQLVIEELEGKIKRQKDRIESESLLLKGIEEDIAGME
EEKSKLDETLTSQKSDLSAKEATLQASKDNLKRLEQNIIKLEELQDKLEEGQTYTDLVTL
TNQEIDVKEKEIDETSELIEENTAQQKGKEASIAEINKIKTEINKEISKVHQEIKALSTE
IKLLEKSIKKNTKKLEKLESDLAKLKKEGESVEEAIKTTSEEANEISKTINDLKSKIEEQ
KKRQKEIDKELLKLEKSRDKANQKLADIQAAISSTGAEIKMIEKQIEDLETRKNKMQKEY
DRLTKGKKVEDQINELKKSEKEILENLKNAKESLKKANDDQKRSENKKEGLEHKRRTLES
ELADFEKRLSGLKVELKNAQNELKTAEREKSANDLKMANVQKEIEALTSEKSKFDKQAQN
IQNKLTQLQEERKILQEQIDKKETEQEQNSSELQSVLGTLQSLMENIDRSAGNVKSDIQN
ASQVAIDESESVLRSFVMDITDMLGTINEIAGKQAQEIKEELEQVVTTLNFLIENSDQPI
QQLNEVVKEASEEALLESTSNFDGFIADFVNKFDSIRLALQAIAISDTSEVYKALDGLNE
GIQRDQNKLAELKNNLTKIETQLEQKNKDQSELKILIGNLTKSIEENSKRVEKGNKENQE
KSEQIELNENEIKKLTQDLDGIKKFSENYWKITKELQETIDKHTSELAQVQADLNDLGSV
KRILDDIENATQDQVSLSEDIEAKKKTINDLEKSSDTAKADVQAVVENTKTVKGERDIAD
EKRNELQIQIDEENEKLKEVTARLKDLENVQKLISDIETLNHENEEAQTKIEDNSKQIEV
LEGEITTQEEKIVAEDAEIEKIQAERKELEEKEKILRNTIKQLSNEKNNLEKTRDKQKQM
QNRAEEIDDLKNEMGELGDAIADLEEKIKEIIENIGKLELERSEKLDQLSELQSQKSDSW
QKQKGMQEELSDLNSDLSRNSAKFNNLETRKIVLEERIDELFEKSKDYGTLPPVTDDLAE
ASLNQAIAKATNEKTALEPVNLKSIEEYEVVRERWDEIDMRRQTLQRERKAILDSIDRIE
LEKTRNFMKAYHEINRVFSNVFQQLSPGGSAKMILENPAHPFEAGINIEARPRGKKISSL
TILSGGEKTLVALSFIFAVQNFYPAPFYIMDEIDAALDGPNVYRVSMVIKEYAAQAQFLV
ISHREENITNSDRIYGVAMNDGITDIFTVDLEEEKDRDDFGAAIEGTDEEDLDKPIVVDN
DEDDD
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaagaaagaggagaaagttacaactttgacctatataaaacgtgttacaatgagt
ggtttcaagagttttggaaaccgaaccgtcagtgtttctttagctaagggctttacatgc
attattggaccaaatggaaatggtaaatccaatgttattgatgcattatgcttcgcactt
ggccgaatgtcaaaaaaaacaatgcgtgcgaagagtttaaccgatttgatttttgccgga
tcaaaaactaaaaaacccgcaacaaaagcagaagttgagattacttttgacaatcgggat
aaagtttttccaagtgatgcgagtgaatattcgatatcccgatggattcggaaaaaagga
accagtggatataaaattcaaggaaaaaaggcaacacgagagacaattttaaatgcctta
gcacaagcaaacattgatcccgatggctctaatcaatttattcttcaaggtcgtattgtt
gaattgactcacatgaacaccaataaacgacgtgaatttattgaagaactgattggtctt
tctaagtatgatcggatgaaagaacaaactttaaaggaattggagaaagcagataaggat
ttaggtcagtttgaagcaattttcaaagaagttagcgcccaattaaaaaaagttgaaaaa
gaaaaaaatgatgctcttcgatggaaagaattagataatctagtaaaactccataatgct
caactaattgcccttaaaattcacaatttacgccaagaggaagaagaagttgaagcagat
attgaatcaactcaactcgttattgaagaattagaaggaaaaattaaacgccaaaaagat
cggatagaatctgaatccttgcttctaaaagggatcgaagaggatattgctggcatggaa
gaggaaaaatcaaagcttgatgagactttaacctcccagaaatcagatttatcggcaaaa
gaagctacattacaagcaagcaaagataacctgaagcgtttagagcaaaatattatcaaa
cttgaagaattgcaagataaattggaagaaggacagacctatacagatttagttacttta
accaaccaagaaattgatgttaaagaaaaagaaattgatgagacaagtgaattgattgaa
gaaaatactgctcagcaaaagggaaaagaagcatcaattgcggaaataaataagataaag
acagaaattaataaagaaatttcaaaggttcatcaagaaataaaagctttatcgacagaa
atcaagttattggaaaagtcaataaaaaagaatacaaagaagttagaaaaattagagagt
gatttggccaaattaaagaaagaaggcgaaagtgttgaagaagcaattaaaactacttca
gaagaagctaatgaaatttctaaaaccattaatgatttaaaaagtaaaattgaagagcag
aaaaaacgtcaaaaagagattgataaagaattacttaaactagaaaaatctcgtgataaa
gcaaatcaaaaattggcagatattcaagcggcaatttcttccacaggtgcagaaatcaag
atgatcgaaaaacagattgaagatctcgagacacggaagaataaaatgcaaaaagaatac
gatcgattaaccaagggaaagaaagttgaagatcagatcaacgaattgaagaaatctgaa
aaagaaattttggaaaacttaaaaaatgcgaaagaaagcttgaaaaaagctaatgatgat
cagaagcgatcagaaaacaaaaaggaaggattggagcataaacgtagaactttagaaagt
gaattagcagatttcgaaaagagattatctgggctaaaagttgaattaaaaaatgctcaa
aatgaattaaaaactgctgaacgtgagaaaagtgctaatgatctcaaaatggcaaatgtc
caaaaggaaattgaggcactgacttcagaaaaatcgaaatttgacaagcaagctcagaac
attcaaaataaactgacccaacttcaagaagaaaggaaaatattgcaagaacaaattgat
aaaaaagaaactgagcaagaacaaaattccagtgaattgcaaagtgtgttaggaacgctt
caaagtttaatggaaaatatcgatcgatccgctggaaatgttaaatctgatatacaaaat
gccagtcaagttgcaattgacgaatctgaaagcgtgctacgtagttttgtcatggatata
acagacatgttgggtacaataaatgagatagcaggaaaacaggctcaagaaatcaaagaa
gagttagaacaagttgtcacgactttaaatttcttgattgaaaactcagatcaacccatt
cagcaattaaatgaagtagtaaaagaggcaagtgaagaagccttacttgaatccacatcg
aattttgatggattcattgcagattttgtaaacaaatttgattcaatccgattagctctc
caagcgatcgctatttctgatacatcggaagtatacaaagcactagatggattaaatgaa
ggaatacaacgagatcagaacaaacttgcagaactaaagaataatttgacaaagattgag
acccaattagagcaaaagaacaaagatcaaagcgaacttaaaatactaatcggaaatctt
acaaaatcaattgaagaaaattccaaacgggttgagaagggaaataaagaaaatcaagaa
aaatcagagcaaattgagctcaatgagaacgaaattaagaaactcacccaagatctcgat
ggaattaagaaattttctgaaaattactggaaaattacaaaagaattacaagaaactatt
gataagcatacttctgaattagcccaagttcaagcagatctcaatgatttaggcagtgtg
aaaagaatcttagatgatattgaaaatgccactcaagatcaggtcagtctttcagaggat
attgaagctaaaaagaaaactataaatgatttagagaaaagtagcgatactgcaaaagca
gatgttcaagcagtggtagagaatacaaaaactgtcaaaggagaacgtgatattgctgat
gaaaaacgaaatgagcttcaaattcaaatagacgaggaaaatgagaaacttaaagaagta
acagcacgattgaaggatttggaaaacgttcaaaagttaatttcagatattgaaacttta
aaccatgaaaatgaagaagctcaaacgaaaattgaagataattcaaaacaaatagaagtt
cttgaaggagaaataaccactcaagaagaaaaaatcgtagcagaagatgctgaaattgaa
aaaattcaagcagaacggaaagaattagaagaaaaagaaaagattttgcgcaatacaatt
aagcaacttagtaatgaaaagaataatttggaaaaaacgcgtgataaacagaaacaaatg
caaaaccgggcagaagaaattgatgacttaaaaaatgaaatgggtgagcttggagatgca
attgcagatttggaagaaaaaatcaaggaaattatagagaacattggaaaattggagctt
gaacgttcagagaagttagatcaattatccgaattacaatctcagaaatctgattcatgg
caaaaacaaaagggaatgcaagaagaattaagtgatcttaattccgatctctccagaaat
agtgcgaaatttaataatttagaaacgcgaaaaatagtattagaagaacgtatagatgaa
ttatttgaaaaatcgaaggattatggaactcttccaccagtaaccgatgatcttgcagaa
gcatctttaaatcaagctatagcaaaagcaacgaacgaaaaaacggcattagaacctgta
aacttgaagtctattgaagaatatgaagtagttcgggaacgatgggatgaaattgatatg
cgccggcaaacattgcaaagggaacgtaaggcaatcttagattcaattgatcgtatcgaa
ttggagaaaactaggaattttatgaaagcttatcatgaaatcaatcgcgtattttccaat
gttttccaacaattaagccctggaggatctgcaaaaatgattttagagaatcccgctcat
ccttttgaagcagggattaatattgaagcccgaccgagaggtaaaaaaatctcttcctta
acgatattaagtggaggagaaaaaactttagttgcactttcctttatttttgctgtccag
aatttttatcccgctccattttatattatggacgaaattgatgctgcgttggatggacca
aatgtatatcgtgtttcaatggttatcaaagaatatgctgcccaagcacaatttttagtc
attagccacagggaagaaaatataaccaacagcgacaggatttatggggttgctatgaat
gatggtataaccgatatttttactgttgatctcgaagaagaaaaagatcgtgatgatttt
ggtgccgcaattgaaggtaccgatgaagaagatcttgataaaccgatagtagtagataat
gatgaagatgatgattag
DBGET
integrated database retrieval system
