Candidatus Lokiarchaeum ossiferum: NEF87_002969
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Entry
NEF87_002969 CDS
T09593
Name
(GenBank) tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lob03016
]
NEF87_002969
Enzymes [BR:
lob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NEF87_002969
Transfer RNA biogenesis [BR:
lob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEF87_002969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
DnaJ_CXXCXGXG
DUF5351
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
UYP46684
LinkDB
All DBs
Position
complement(3505669..3507189)
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AA seq
506 aa
AA seq
DB search
MPDSPENFEEEEIKEEKEEIKIINMEPSLYKQTVSILRYHNLCFECFGRQFSFLGTATNN
TDRAKAILLGLTMECHQLLIKNLVLEKFTLFDQNPLEILHLIANRTGLIQAKKMLEKWYR
AHPDEVQDHLTINSIRSPCDLCTDLLTDTTLQTLVQKIQILIRKYDYNNFLVGTYVNPAQ
GDKEDEFRSKFGVTNGESFKANLNRLLGVRLQKTLQKPTKFEKPDLTIMVNLRESNIPKI
EITSSPLYLRARYLKFVRDLPQTHWHCHFCRGRGTHKFTGEICPECHGSGDMFPSSVEDL
IAETLLPATGGEKAILHGAGREDLDARCLGAGREFIMEIKEPRSRHLNYLELTQTINKQH
GKSIHVTNFTVASKKDVIKFKKNSEFNKKKYHALVELAQPISLEEANVKFAMVSEQLCEK
KIKQRTPLRVVHRRPDKTRTKIIYSIECKYVDPLHIYLKVLAQGGTYIKELISGDNFRTS
PSIATIFNIPMVCAELDVVQIEELQV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattcgcctgaaaattttgaggaagaagaaatcaaagaagagaaagaggaaatt
aaaattataaatatggaaccttctctttacaaacagactgtttcaattctccgttaccat
aatctttgttttgaatgtttcgggcgccaattctcatttttggggacagctaccaacaat
acagatcgtgctaaagcaattctcttaggtttaactatggagtgccatcaactcctgatc
aaaaacttggttttagaaaaatttaccttatttgatcagaatccccttgaaattttgcat
cttattgcaaatcggaccggcttaatccaagcgaaaaaaatgttagaaaaatggtatcga
gctcatcccgatgaagttcaagatcatttaaccattaattctataagatctccatgtgat
ttatgtacagatctactcactgacaccacccttcaaactcttgttcagaaaattcaaatt
ttgatacggaaatatgattacaataacttcttagtcggaacttacgtcaatcccgctcaa
ggggacaaagaagacgaatttcggagtaagtttggggtaaccaatggtgaatcttttaaa
gcaaatttgaaccgtttgttaggagttcgattgcaaaaaacacttcagaagccgacgaaa
tttgaaaaaccagatcttacgattatggtgaatttacgagaatcaaatatccctaaaatt
gaaattacttcttcacccttatatttacgcgcccgttatcttaaatttgttcgagatctt
ccccaaacacactggcattgtcatttttgccgcgggcgaggaacacacaaatttaccggt
gaaatatgtcctgaatgccatggatcaggagacatgttcccaagttctgtggaagatctt
atcgctgaaacattgctacccgcaactggtggagaaaaggcaattctacatggtgcagga
agagaagatctggatgcccgatgtttaggagcagggagagagttcataatggaaattaaa
gaaccaagaagtcgtcatttaaattatcttgaactaactcaaaccattaataaacaacac
ggtaaatccattcatgttaccaattttactgttgcatcaaagaaagatgtgatcaaattt
aagaaaaactcagaatttaacaaaaaaaaatatcatgcgttagtagaattagcccaacct
atcagtttagaagaggcaaatgtcaaatttgcaatggtttcggaacaattatgcgaaaaa
aaaattaaacaacgaacacccttacgagtggttcatcgcagacctgataaaacacgaact
aagataatttattccattgaatgcaagtatgtggatcctttgcacatttacttgaaagtc
ttagctcaaggtgggacatatatcaaggaattaatttccggcgataattttcgcaccagc
ccatccattgcaaccattttcaatattccaatggtttgtgccgaattagatgtagtacaa
atcgaagaattacaagtttaa
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