Candidatus Lokiarchaeum ossiferum: NEF87_003640
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Entry
NEF87_003640 CDS
T09593
Name
(GenBank) Ribulose bisphosphate carboxylase large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob00630
Glyoxylate and dicarboxylate metabolism
lob00710
Carbon fixation by Calvin cycle
lob01100
Metabolic pathways
lob01110
Biosynthesis of secondary metabolites
lob01120
Microbial metabolism in diverse environments
lob01200
Carbon metabolism
Module
lob_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NEF87_003640
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
NEF87_003640
Enzymes [BR:
lob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
NEF87_003640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
UYP47355
LinkDB
All DBs
Position
complement(4262540..4264207)
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AA seq
555 aa
AA seq
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MVKIENWVVFPEKVELPIITCDLYEAYGLATPKIELIDEKMRVRLGPYLLDPEIPFNFED
FRKSCIIMYVSISPKLRKGWSVEYGLLRAALEIAAEESTGTWDPELKTLLPEEMDENSKA
NMKILEAKVIGLNAKNGMAAVALPKEGFEKGNLPQILSVVMGNYTGMASAAWGVRLEDID
IPDDFANSFIGPTIGNEGIKKILGNKITVGTIVKPKTGLSEADWAKTSTRSFYGGLDVVK
DDENLTSQDYCTFEERAKLVMKGINEIHEKTGRNLVYVANITHGDMDEMIKRADLIKSLG
GNCLMLDILATGMTGVQTIRKKYPEMILHGHRAGHGAQTIFPELIIDGERIDLRHGISMK
VWALIARLGGIDQFHIGAPKGKMESSYHTVLENLETCLRPLGNIKTMRPICSGGLKATVL
WDVATIMNPIGDTPNLDFIAQAGGGTHSHPLGTIGGSRSMVQARDSISAGDSPQVAMGKY
FETLLAFRRWDNEIYGNWLKTLTADSKIVVDPDERPYFLTENHPETAPKPVDLKTAMEKF
PELRADLEKFSPTLL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatagaaaattgggtagtttttccagaaaaggttgaactaccaataattaca
tgcgacttatatgaagcctatggattagcaactccaaaaattgaattgatcgatgaaaaa
atgcgagttagattgggaccctatttattggacccagaaattccctttaattttgaagat
tttcgtaaatcttgcatcattatgtatgtatcgattagtccaaaacttcgaaagggatgg
tctgtagaatatggattacttcgcgcagctttggaaattgctgctgaagaaagtaccggt
acatgggatccagaattaaaaacactcttacccgaagaaatggatgagaattccaaagcc
aatatgaaaattttagaagcgaaagtcataggattgaatgctaaaaatggtatggcggca
gtagcacttcccaaagaaggatttgaaaaaggaaacctccctcaaattttaagcgtagta
atgggaaactataccggaatggccagtgctgcttggggtgttcggcttgaggacatagat
attccagatgattttgcaaactcctttattggacccacgattggaaacgaaggaataaag
aaaatattggggaataaaattacagttggtaccatagttaaaccaaaaacaggccttagc
gaggcggattgggccaaaacatcaacacgatctttttatggaggattggatgttgtaaaa
gatgatgaaaacctcacttcacaagattattgcacgtttgaagaacgcgctaaattggtg
atgaaaggaatcaatgaaatacacgaaaaaacaggaagaaatctcgtgtatgtcgccaat
attactcatggtgatatggatgaaatgataaaacgagcagatctaattaaatcattagga
ggtaattgtttaatgttagatattctcgcaacaggaatgacaggagtccaaaccattcga
aaaaaataccctgaaatgattttacatggtcatcgagcaggacatggagctcaaacgatc
tttccagaattaattatagacggtgaacgaatcgatttaagacatggtatttccatgaaa
gtctgggctttaattgcacgcttaggaggaattgatcagtttcacattggagcacccaag
ggaaaaatggaatcttcttatcatacggttttagaaaacttggaaacttgtttgcgacct
ttagggaatattaaaactatgcgaccaatttgttcagggggattaaaagcgactgtctta
tgggatgtagcaaccataatgaacccaattggagatacaccaaatttagatttcattgcc
caagcgggaggaggtacccattcacaccccttaggcacaattggaggctcccgatcgatg
gtacaagctcgagactccatttcagcgggagattccccacaagttgcaatgggcaaatat
ttcgaaactttgctcgccttcagaaggtgggataatgaaatatatggaaattggttaaaa
actttaactgcagattcaaaaattgtagttgatcctgatgaacgaccgtacttcttgaca
gaaaatcaccccgaaactgctccaaaaccagtggatctaaaaactgctatggaaaaattt
ccagaattacgagcggatctggaaaaatttagcccaactctcctgtaa
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