Candidatus Lokiarchaeum ossiferum: NEF87_003785
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Entry
NEF87_003785 CDS
T09593
Name
(GenBank) Dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lob03009
]
NEF87_003785
Enzymes [BR:
lob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
NEF87_003785
Ribosome biogenesis [BR:
lob03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NEF87_003785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
UYP47500
LinkDB
All DBs
Position
4423490..4424560
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AA seq
356 aa
AA seq
DB search
MLFINEGALLKVGMKENILSFTSEELKSVFKQKYNQPSYRAVQVFGWLYKDISSFDEMQN
VPKKLRENLTRDFFNGQMGIFQSHRSHDGTEKFLLKCQDDNIIEAVKMEYHHGTSVCIST
QVGCEMGCIFCASGREGLVRNLSAGEMIGQILAIQKHAKKRISNIVLMGAGEPLQNFIEV
QKFLELVHDPKGLNVGYRHITLSTCGLVPEIYNLAELNLPITLAISLHSPSDIERSRIMP
INRKYPLKDLIYACLAYTKKTKRRITFEYALIKGKNDTIADAEALIKLIKPVSGHVNLIP
INTTDTKLQAPDLQWVQNFNEFLNSHGQNATIRRNMGSDINAACGQLRWQYLKKSE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttattaacgaaggagcgctattaaaggtaggaatgaaagaaaatatcttatcg
tttaccagtgaagaattaaaatccgtattcaaacaaaaatataatcaaccctcctaccga
gcagttcaagtatttggctggttatataaagatatttcgtctttcgatgaaatgcaaaat
gttcctaaaaagttacgtgaaaatttgacccgtgatttttttaatgggcagatggggata
tttcaatcccaccgatctcatgatggaacagagaaattcttgttgaaatgccaagatgat
aatatcatcgaagcggtcaagatggaatatcatcatggaacatctgtctgtatatctacc
caagtggggtgcgaaatggggtgtattttttgtgcttccggtagggaaggattagtacga
aacctctctgccggggaaatgatcggtcagattttggctattcaaaaacatgcaaaaaaa
cgaatttcgaatattgtccttatgggtgctggagaacctctccaaaattttatagaagta
caaaaatttttggaacttgttcatgatcctaagggtttgaatgtagggtatcgtcatatc
acactttctacttgtggattagttccagaaatatacaatctcgcagaattgaaccttcct
atcactctcgccatttcattgcattctccttcagatatagaacgttctcgtatcatgccg
attaatagaaaatatcctcttaaagatttaatttatgcttgcttggcatatactaagaaa
actaagcgtagaatcacttttgagtatgcattgattaaaggtaaaaatgataccatcgct
gatgcagaagccttgatcaaattaattaaaccggtttcgggtcatgtgaatttgattcca
attaatacaactgataccaaacttcaggctccggatctgcaatgggttcaaaatttcaat
gagtttttgaattctcatggacaaaatgcaaccattcgaagaaatatgggctctgacatt
aatgcagcatgtggacaacttcgatggcaatatttgaaaaagtctgaatag
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