KEGG   Candidatus Lokiarchaeum ossiferum: NEF87_003796
Entry
NEF87_003796      CDS       T09593                                 
Name
(GenBank) Flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
lob  Candidatus Lokiarchaeum ossiferum
Pathway
lob03030  DNA replication
lob03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NEF87_003796
   03410 Base excision repair
    NEF87_003796
   03450 Non-homologous end-joining
    NEF87_003796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lob03032]
    NEF87_003796
   03400 DNA repair and recombination proteins [BR:lob03400]
    NEF87_003796
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lob04147]
    NEF87_003796
DNA replication proteins [BR:lob03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NEF87_003796
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NEF87_003796
DNA repair and recombination proteins [BR:lob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NEF87_003796
Exosome [BR:lob04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NEF87_003796
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc XPG_I_2 COMMD9_HN
Other DBs
NCBI-ProteinID: UYP47511
LinkDB
Position
4432964..4434133
AA seq 389 aa
MGVKLKSLIISERKEIDDIKGSKIAVDGMNVLFQILYNPIQMQKKLPDTFYLDSTRRVIT
HLYGWMQKIKYFYKHQILPIVVFDGKPDPFKRLSTKDYARDFLAVEKMYKDCIDKGEKAL
AKRHALSRSYMFMNCVHESKILLEACGIPVLMAPSEAEAQCVSLQQQGLVDYVLSNDYDV
LLFGATKVIRKLTFQSRKKIKGKWTIYKPEIEILDGPANLKRLGINLHQLIDLSILLGND
YFSGIAGIGSKKALESLEYYGSIEKMLLSHPNRFSGLSINKLHKIRNLFLNPENIKISEL
SFKTFNESKLHELLLKDHSLNPEKVKRNIVSLHALHDKVCKKKNLSHPQSAQKVFPPFNK
HLQRRLDRAKKKRNLPDLPSLSFTSADHL
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgggtgtaaaattgaaatctctcatcattagtgaaagaaaagaaattgatgatataaag
ggatccaagatcgcggtggatggcatgaatgtactatttcaaattttgtataatcccatc
caaatgcaaaaaaaattacctgatacattttatctggattccacccgtcgtgttatcacc
catctctatggatggatgcaaaagattaaatatttttataaacatcagattcttcccatc
gtagtttttgatggaaaacccgatccattcaagcgtcttagtactaaggattatgcacgg
gatttccttgcggtcgaaaaaatgtacaaagattgcatagataaaggggaaaaagcactc
gcaaaacgtcacgcactcagtcgttcttatatgttcatgaattgtgttcatgagtctaaa
attttgttggaagcctgtggaattccagtcctaatggctccttcagaagcggaagctcaa
tgtgtgtcattacaacaacaaggattagtggactatgtgctttccaatgattatgatgtt
ctcctatttggagctaccaaggttatcagaaaattaactttccaaagccgaaaaaaaatc
aaaggtaagtggacaatttataaaccagagatcgaaattttggatggtcctgctaacttg
aaacgacttggaataaatctccatcagttaatcgatttgagcattcttttagggaatgat
tatttctcgggaattgctggaattggttcaaaaaaggctctggaatcccttgaatattat
ggatctattgaaaaaatgctcttatctcatccaaataggttttctgggctatcgataaat
aaattgcacaaaattagaaatttatttttaaatcctgaaaacattaagatctccgaattg
tccttcaaaaccttcaacgaatcaaaattacatgaattacttctgaaagatcattctctt
aatccagaaaaagtcaagaggaatatagtatcacttcacgcacttcatgacaaagtgtgt
aaaaaaaaaaatttatctcatccgcaaagtgctcaaaaagtctttcctccttttaacaag
cacctccaacgtcgtttggatcgagcaaaaaaaaaaagaaatctacccgatcttccatcg
ctgtccttcacttccgctgatcacctatga

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