KEGG   Candidatus Lokiarchaeum ossiferum: NEF87_004017
Entry
NEF87_004017      CDS       T09593                                 
Name
(GenBank) Signal recognition particle 54 kDa protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lob  Candidatus Lokiarchaeum ossiferum
Pathway
lob02024  Quorum sensing
lob03060  Protein export
lob03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    NEF87_004017
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NEF87_004017
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NEF87_004017
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lob02044]
    NEF87_004017
Enzymes [BR:lob01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     NEF87_004017
Secretion system [BR:lob02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   NEF87_004017
  Eukaryotic Sec-SRP protein
   NEF87_004017
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N nSTAND3 AAA_30 AAA_22 cobW AAA_16 MobB ATP_bind_1 AAA_17 NTPase_1 MeaB AAA_19 CbiA SWI2_SNF2 AAA_18 NPHP3_N G-alpha MipZ Zeta_toxin ResIII AAA AAA_24 Redoxin AAA_33 MMR_HSR1 ABC_tran AAA_14 DO-GTPase2 AAA_5 YqeC ATPase_2
Other DBs
NCBI-ProteinID: UYP47732
UniProt: A0ABY6HW40
LinkDB
Position
4682817..4684256
AA seq 479 aa
MVLEGLGKSLDGLIRKVRRLPEINKDVINALIKELQRSLLMADVNVEICLQVTEIIKKRA
MDQKINEKINRKDYIIKILHDELINLLGGKDAPKRIKTGKETIILLVGIQGSGKTTTVGK
LANFYKKKGFKVGAVCTDTDRPGAYEQMAQTMDSIGVAHFGNPKEKSALKLAKKGLKQFT
KSGKDKKDLIIVDTAGRHKEESGLMKEMQKLENVIKPNETILVIDGTLGQQAYSQAKAFS
ETTHVGSIIITKLDGSAKGGGALSAAAAAKAPIKFIGVGERVDDLDEFSPTSFVGTLMGI
PDLEGLLKKIEELGIEPDDDQISRMKKGKFTLNDMYDQMKSLRKMGGFGKVLAMMGGANI
PKEVKEMAEGNMDRIEVMMKSMTPHERDNPEVIRKTRITRISRGSGTTYTEVKGLLKQWS
QMNSMMKGMLGRKRRGKRGQQVPGMDGGMPGMDGGGMPDLAQMQQMMGNQKKKRKKYLW
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggtgcttgaaggattagggaaatcactggatgggcttattaggaaggttagaagactc
cccgagattaacaaagatgttattaacgctttaattaaggaattgcagcgtagcttgtta
atggctgatgtcaatgttgagatatgtttacaagtgacagaaataattaagaaacgggct
atggatcaaaaaataaatgaaaaaattaaccggaaagactatataattaaaattctccat
gatgaattaataaatctattaggtgggaaagatgcaccgaaaagaattaaaacgggtaag
gaaacaatcattcttttagttggtattcaagggtctgggaaaaccacgaccgttggcaag
ctcgctaatttctataagaaaaaaggattcaaggttggagcagtatgtaccgatacggat
cgacctggagcatatgaacagatggctcaaacgatggattctattggtgtagctcacttt
gggaatccaaaagaaaaaagtgccctcaagttagctaaaaaaggattaaaacaatttacc
aaatcaggaaaagacaaaaaagatcttattatcgttgataccgctgggcgtcataaagaa
gaatcgggtttaatgaaagaaatgcaaaaactcgaaaatgtaattaagcccaatgaaacc
atactcgtgatcgatggaactttggggcaacaagcctattcccaagctaaagctttttct
gaaacgacccatgtgggaagcattattattacaaaactcgatggttctgcaaaagggggt
ggtgctctttccgcggcagctgctgccaaagcacccattaagtttattggggtgggagaa
agagttgacgatttggacgaattcagccccacttcttttgttggaacattaatgggcatt
cctgatttagaaggactcttgaaaaagattgaagagttgggaattgaacccgatgatgat
cagatttcccggatgaaaaaagggaaatttaccctaaatgacatgtatgatcaaatgaaa
tctctccgcaagatgggaggttttggaaaagtacttgctatgatggggggtgccaatatt
ccgaaggaagtcaaagaaatggcggaagggaacatggatcgtatcgaagtaatgatgaaa
tctatgactccccatgagcgggataatccagaagtgattcgaaaaactcgaattacccga
atttctcgaggaagtggtacaacctataccgaagttaagggtttattgaagcaatggtca
caaatgaattctatgatgaaaggaatgctcggtagaaaacgacgtggtaaacggggtcag
caagtgccagggatggatggtggaatgcctggaatggatggaggaggcatgcctgatctg
gctcaaatgcaacaaatgatgggtaatcagaagaaaaaacgtaagaaatacctttggtaa

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