Candidatus Lokiarchaeum ossiferum: NEF87_004103
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Entry
NEF87_004103 CDS
T09593
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEF87_004103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_004103
Transcription machinery [BR:
lob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NEF87_004103
Prokaryotic type
Archaeal type
TFB
NEF87_004103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
RB_B
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
UYP47818
UniProt:
A0ABY6HWA8
LinkDB
All DBs
Position
4784932..4785753
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AA seq
273 aa
AA seq
DB search
MVIAPHLINSERRAYNASEINSRRRTEPLWRSFGNRTIIGQYVTDARGKQLHPQKRALFA
RLSKIQGSLINSLERNYWEAKPKLSTLCNRLSIPDFIQETAWKIYKISAKMKLTMGRSIE
GFIAASIYAAIRVHEYPRLLEEIVEVSLLPMRSIHKSLALVVREVLPTLDLRYRPILSER
LIHRFGNELDLSMPIQQKARKILFSAKRLGLARTGKDPKGIAAAVLYLAAKDSGEKRTQS
HIAKVARITEVTLRTRAKQIHQISKKIELPQMS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggtgattgcaccccaccttatcaattcagagcgacgtgcgtacaatgcttctgaaatt
aattcccgaagacgaactgagccattatggcgatcttttggaaatcgaacaatcatcgga
caatatgtgacagatgcccgaggaaaacaactgcatccacaaaaacgcgcgctttttgca
cgtttgagtaaaatccaaggttcgttaattaattctctagaacgaaattattgggaagcc
aaaccaaaactttcaactttgtgtaatcgtttatcaattcccgattttattcaagaaact
gcatggaagatctataaaatctctgctaaaatgaaacttaccatgggaaggtctattgaa
gggtttattgctgcaagtatttatgctgcaatccgtgttcatgaatatccccgattactt
gaagaaattgttgaagtgtctttgcttccgatgcgaagtatccataaatctttagcttta
gtggtacgtgaagttctacctacattagatttacgttatcgccctatattaagtgaacgc
ttaattcatcgttttggaaatgaacttgatttatccatgcccattcaacaaaaagcacga
aaaattttgttttctgccaagcgcttgggattagcacgaacaggtaaggacccaaagggt
attgctgcggccgttttatacttggcggcaaaagattctggtgaaaaacgtactcagtct
catattgcaaaagttgctcgtattaccgaagtaactctgcgaacaagagcaaaacagatt
catcaaatttctaaaaagattgaacttcctcaaatgagttaa
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