Candidatus Lokiarchaeum ossiferum: NEF87_004145
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Entry
NEF87_004145 CDS
T09593
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lob03016
]
NEF87_004145
Enzymes [BR:
lob01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NEF87_004145
Transfer RNA biogenesis [BR:
lob03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NEF87_004145
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
UYP47860
UniProt:
A0ABY6HWF6
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All DBs
Position
4843985..4844611
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AA seq
208 aa
AA seq
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MCPLSYQGETVEDQLTNAQLLESGEFPLTPISVSLLGTKLVVFNNIHGSLLYGYGRYFGI
PTGIRKPRNHIFDRPLELTLFEGVYLLKHKKIAVRDHDSSGFITFEDLYALAETKFPEFT
DKYLIYEDLRNKKYIPRPGQKFGADFIVYRQGPGIDHSSFCIQVLSKHTKISSIDVVRSA
RLATSVKKRFILANPVNKSYFSFKWFKP
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcctttatcctaccaaggtgaaacagtcgaggatcaattgacaaatgcacaactg
ctcgaatcaggggagttcccattgactcctatatctgtttctctgcttggaactaaactc
gttgttttcaataatattcatggctccttattgtatggatatgggagatattttggaatc
ccaacgggaattcgaaaacctcggaatcatattttcgatcgacccctagaactcacctta
tttgagggtgtttatctcttgaagcataaaaaaatcgctgttagagaccatgattcttcg
ggtttcataacctttgaagatctttatgctttggctgagacaaaatttccagaatttacg
gataaatacttaatttatgaagatttacgcaataagaagtacattccccgcccagggcaa
aaatttggtgcagattttatcgtttatcgtcaagggcctggtatcgatcattccagtttt
tgtattcaagtgttatctaaacacactaaaatttcttcaattgatgttgtacggagtgct
cgattagccactagtgtcaaaaaacgttttattttagcaaatcccgtgaataaatcttat
ttttcattcaaatggtttaaaccgtga
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