KEGG   Candidatus Lokiarchaeum ossiferum: NEF87_004172
Entry
NEF87_004172      CDS       T09593                                 
Name
(GenBank) hypothetical protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
lob  Candidatus Lokiarchaeum ossiferum
Pathway
lob03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NEF87_004172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lob03000]
    NEF87_004172
   03021 Transcription machinery [BR:lob03021]
    NEF87_004172
Transcription factors [BR:lob03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    NEF87_004172
Transcription machinery [BR:lob03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     NEF87_004172
  RNA polymerase III system
    TFIIIB
     NEF87_004172
  RNA polymerase I system
    SL1/TIF-1B
     NEF87_004172
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: UYP47887
UniProt: A0ABY6HZY3
LinkDB
Position
complement(4880856..4881524)
AA seq 222 aa
MELIELPPNQIDVYPGSLEETLTDDATNFPYKIINIVCLAKMTRPDPESKINFEELEKRI
TVKRLNRFPCVLFKIDEISVILFKNGKLILTGIKKRETIEPLRLKIIDHLRNKGKLEFSE
MTTEIQNLVVMSQLGKIINLEMACLTLTNCLYEPEQFPAAIIKPTTGGTFLIFSNSKIIG
LGMKSMDMVKNSLKNLISDIFENDLFIRVNDDDPFDDDQLFF
NT seq 669 nt   +upstreamnt  +downstreamnt
atggaacttatagaattacccccaaatcaaatcgatgtttatcctggatcattagaagaa
actttaacagacgatgcaaccaattttccatacaaaataattaatattgtgtgtttagcg
aagatgacgcgtccagatcctgaatctaaaataaatttcgaagaactagaaaagcggatt
actgtcaaaagactgaatagatttccatgcgttttattcaaaattgatgaaatttcagtt
attttatttaaaaatggtaaattaattttaacaggtattaaaaaaagagaaactattgag
cctttacgattaaaaataatcgatcacttgcgtaataagggtaagctcgaattttcagaa
atgacaacagagattcaaaatctggtagtaatgtcccaattaggaaaaataattaattta
gaaatggcttgtttaactttaacaaattgcttatatgaacctgaacaatttccagcagca
attatcaaaccaacgacaggcgggacatttttaatcttttctaatagtaaaatcattgga
ttgggtatgaaatcaatggatatggttaaaaactcgttaaaaaatcttatttcagatatt
tttgagaatgatctttttattcgcgttaatgatgatgatccatttgatgatgatcaactc
tttttttag

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