Candidatus Lokiarchaeum ossiferum: NEF87_004585
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Entry
NEF87_004585 CDS
T09593
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lob03032
]
NEF87_004585
03400 DNA repair and recombination proteins [BR:
lob03400
]
NEF87_004585
Enzymes [BR:
lob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NEF87_004585
DNA replication proteins [BR:
lob03032
]
Prokaryotic type
DNA Topoisomerases
NEF87_004585
DNA repair and recombination proteins [BR:
lob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NEF87_004585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UYP48300
UniProt:
A0ABY6HXQ4
LinkDB
All DBs
Position
5395497..5398082
Genome browser
AA seq
861 aa
AA seq
DB search
MSQSPDPDKNNPEIPEDDDITDASFIIDKEIKDELSKSYIDYAMSVIVGRAIPDVRDGMK
PVQRRILYTCEQNNFLYNRPTRKCARIVGDCMGKYHPHGDQSVYAALVRLAQPFSVRYML
VDGQGNFGSVDGDSAAAMRYTEARLAKISNDMLADIDKNTVDFVDNFDGSLKEPAYLPAK
LPMILLNGASGIAVGMATNIAPHNLREVSDAIVASIEMGPSNFTPTDAAKYIRGPDFPTG
GIMMGQQGAFDAITTGRGAIVVRGKAEIEINGAGKNKDAIIITEIPYMVNKARLIENIAD
HVNKNVIPEISDIRDESDRNGMRIVIELKKNSDANACLNRLYLKTQLQNSFNIINLMLVN
NGLQPQVLNYAEIIKEFIDHREKVIQRRTEFELAKAKNRLHIIEGLLIAINNIDEIVQLI
KKSANPAEAAEQMMEKFGLTEIQAAEILKMPLSRLTNLQTQKLVDEETDLKVKIAEFETI
LGDYNVRLQIVKDETIEMAAMYGDERRTEIQETFEALKINYKETVPEEDCVIMITRNQTI
KRMTLENYQAQGRGGKGKRGMNMREEDIVQEMFIASSHDTILLFTQQGRVYSIPAFTIPL
ASRNAQGKALVNYVNLKSAEKIIDITNVSDFEGNRSLVFVSSKGMIKKVKLSAFAKIRKT
GIHCMNVKDNDQLVKVKLCEPGKEVFVATKTGHAIHFKEDELRLIGRTAMGVKGVTLRSE
VDEVVDLVVADPTTNIVTLSKLGYGKNSELSLYRLTHRGGKGVINIKLREGDEVIASKSV
PEEKNLLLVSVKGIIIRVRTEDIRETGRAAKGVIVMRLGEDDAVSSVALCDAMDESIPDE
SAIEPDDPEIVPDDPNNNLKD
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatcaccagatccagataaaaataatcccgaaattcctgaagatgacgatata
acagatgcatcatttattatcgataaagaaatcaaagatgaattgagtaaatcctatatt
gattatgctatgtccgtgattgtaggaagagcgattccagatgttcgcgatggaatgaaa
ccggttcagcgtcgtattttatatacgtgcgaacaaaataattttctctataatcgacca
actcgcaagtgtgctcgtattgttggagattgcatgggtaaatatcatccccatggtgat
caatctgtatatgctgcattagttcgattggcacagccgttttctgtccgatatatgtta
gtggatggacaagggaactttggttctgttgatggggattctgctgcagcaatgcgttat
acggaagcacggttagcaaagattagcaatgatatgttagctgatattgataaaaacaca
gttgattttgtcgataactttgatggttctttgaaagaaccggcttatttacccgcaaaa
ttgccaatgattttactcaatggtgcttctggtattgcggtcggaatggctacgaacatt
gcacctcataatttgagggaagtttcagatgcgattgttgcctctatagaaatgggacca
tcaaatttcacacctactgatgcggctaaatacattcgagggccggattttccaactggt
ggtatcatgatgggtcaacaaggtgcttttgatgctattacaactggaaggggggctatt
gttgttcgaggtaaagctgaaatcgaaatcaatggagcaggaaaaaataaggatgctatt
attataaccgaaattccttatatggtcaataaagcaaggttgattgaaaatatcgctgat
catgttaataaaaatgttattcctgaaatttctgacataagagatgaatctgatcgaaac
ggaatgcgtattgttattgaacttaaaaaaaatagcgacgcaaatgcatgtttgaatcgg
ttgtatttaaaaactcaacttcaaaattcattcaatattatcaatttaatgcttgtaaat
aatggattgcaaccacaagttctcaattatgccgaaataattaaggaattcattgatcat
cgtgaaaaggttattcaacgacgaactgaatttgaattagccaaagcgaaaaatcgactg
catattattgaaggtttactaattgctataaataatattgatgaaattgtacaattaatt
aaaaaaagtgcaaatcctgctgaagcagcagaacaaatgatggaaaaatttggtttaacc
gaaattcaagcagcagaaattttgaaaatgcccttaagtcggttaacaaatcttcaaact
cagaaacttgtggatgaggaaactgacctgaaagtgaaaattgctgagtttgaaaccatt
cttggagattataatgttcgtttgcagattgtaaaagatgaaaccattgaaatggccgca
atgtatggagatgaacgacggacagaaattcaagaaacttttgaagcgttaaaaattaat
tacaaggaaaccgtacctgaagaagattgtgtcatcatgattactcgcaatcaaactatc
aagcggatgaccttggaaaattatcaagctcaagggcgtggtggtaaaggtaaacgagga
atgaatatgcgggaagaagatattgttcaagaaatgttcattgcttccagtcatgatacc
attttactctttacacagcaaggtcgagtttattctattcctgcatttacaataccttta
gcttcccgtaatgcacagggaaaagctttagttaattatgttaatttaaaatccgccgaa
aaaatcattgatattactaatgtaagtgattttgaaggtaatcgaagtcttgtgtttgtt
tcctcaaaaggaatgattaaaaaagtgaagctcagtgcttttgcaaaaatccgaaaaact
gggattcattgtatgaacgttaaagataatgatcaattagttaaggtcaaactctgtgag
ccgggcaaagaagtatttgttgctacaaaaacagggcatgcaattcattttaaggaagat
gaattacgcttaattggacgtactgctatgggtgttaaaggggtgactcttcggtccgaa
gtagatgaagttgtggatttggttgttgcagatccaaccaccaatattgtaactctgagt
aaattgggttatggcaaaaatagtgaattgagcctttatcgattgacccatcggggtggg
aaaggtgtaattaatatcaaacttcgtgaaggagatgaagtaattgccagtaaatcagtc
cccgaagagaaaaatttactattagtcagtgtgaaaggtattattatacgggttcgtact
gaagatattcgagagacgggacgcgctgcaaaaggtgttattgtaatgcgattgggtgaa
gacgatgcggttagttctgtcgcattatgtgatgcaatggatgaatctattcccgatgaa
tcagcaattgaacctgatgatcctgaaatagttcctgatgatcctaataataatcttaaa
gattaa
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