Candidatus Lokiarchaeum ossiferum: NEF87_004640
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Entry
NEF87_004640 CDS
T09593
Name
(GenBank) hypothetical protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEF87_004640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lob03400
]
NEF87_004640
Enzymes [BR:
lob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NEF87_004640
DNA repair and recombination proteins [BR:
lob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NEF87_004640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
RBD_ZCCHC3_1st
Motif
Other DBs
NCBI-ProteinID:
UYP48355
UniProt:
A0ABY6HXU7
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All DBs
Position
5449674..5450432
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AA seq
252 aa
AA seq
DB search
MKIISWNVNGINSSIKKGFFKFIESEKAEIYCLQEIKVSEKTIDKSFQAPEGYQMYWNQA
ERKGYSGTMVLTNVEPLTVQFGMGIDEFDTEGRLLTLEFDNFYLINAYIPNAGRGLPRLD
FKLDYNQKLYAFMENLQKEKNVILCGDLNVAHKEIDLTNPKSNKKNAGFTIEERNSFTEL
LDLGYIDSFREFESEGGHYTWWSYRNDARARNIGWRLDYFVVNAEFMPKISQSSILSDVI
GSDHCPIKLELK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatttcttggaacgtaaacggtataaactcatctatcaaaaaagggtttttt
aaattcattgaatccgaaaaagctgagatttattgcttacaggaaatcaaagtttcagaa
aaaaccatcgataaatcctttcaagcacctgaaggatatcagatgtactggaatcaagca
gaacggaaaggatatagtggaactatggttttaactaatgtagaacctttaacggttcaa
tttgggatggggatcgatgaatttgatactgaaggtcgtttattaactttagaatttgac
aatttctatctaatcaatgcttatattcctaacgccggtaggggactgccccgtcttgat
tttaaactcgattataatcaaaaattatatgcttttatggaaaacctccaaaaagaaaaa
aatgttattctttgtggtgatttaaatgttgcccacaaggaaatcgatctaactaatccc
aaatcaaataagaaaaacgctggttttactattgaagaacgcaattcttttacagaattg
ttggatcttggatatattgatagttttcgagagtttgaatctgaaggaggacattatact
tggtggtcttatcgaaatgatgctcgggcaagaaatatcggctggcgtcttgattatttt
gtagtaaatgccgaatttatgccaaaaattagtcagagctctattttatctgatgtaatt
gggtccgatcactgtccaataaagttggaattgaaataa
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