Lepisosteus oculatus (spotted gar): 102682231
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Entry
102682231 CDS
T07349
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03082
ATP-dependent chromatin remodeling
loc03083
Polycomb repressive complex
loc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102682231 (rbbp4)
03083 Polycomb repressive complex
102682231 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102682231 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102682231 (rbbp4)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
102682231 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
102682231 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
102682231 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
102682231 (rbbp4)
PRC2.2
102682231 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
102682231 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102682231 (rbbp4)
Chromatin remodeling factors
NuRD complex
102682231 (rbbp4)
NuRF complex
102682231 (rbbp4)
NuRF complex (fruit fly)
102682231 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102682231
NCBI-ProteinID:
XP_006631293
Ensembl:
ENSLOCG00000002213
UniProt:
W5M2I1
LinkDB
All DBs
Position
LG6:complement(2862298..2873529)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGYLLSASDDHTICLWDISTVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGTADA
EVQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaagaagcagcgtttgatgatgccgtggaggagagggtgataaacgaggaa
tacaagatctggaagaagaacacgccctttctttacgatctggtgatgacacacgcgttg
gagtggcccagtctgactgctcagtggctgcctgatgtcaccagacccgaagggaaggac
ttcagcgtccacaggctggtcctcggcacgcacacgtcagacgagcagaaccacctggtg
atcgccagcgtgcagctgcccaacgatgacgcccagttcgacgcctcccattacgacagc
gagaaaggagagttcggcggtttcggctcggtgagcgggaagatcgagatcgaaatcaag
atcaaccacgagggggaggtgaaccgcgctcgctacatgccccagaacccctgcatcatc
gccaccaaaacccccaccagcgacgtgctggtgttcgactacacaaaacacccctctaag
ccagacccctctggcgagtgcaatcctgacctgcgactgaggggtcaccagaaagagggg
tacgggctgtcctggaaccccaaccttagcggataccttctgagtgcatccgacgatcac
actatctgcctgtgggatatcagcactgttccgaaggaggggaaggtggtggacgccaag
accatcttcactggacacacagctgtggtggaggacgtttcctggcacctcctgcacgag
tctctgttcggatcggtcgctgacgaccagaagctcatgatctgggacaccaggtcaaac
aacacgtccaagcccagccatgctgtggacgcccacactgctgaagtcaattgcctgtcc
ttcaacccctatagtgagttcatcctggccacaggctccgcagacaagactgtggctctt
tgggatctgcggaacttaaaactgaagttgcactcctttgagtctcataaagatgaaatt
ttccaggtccagtggtctcctcataatgaaaccatcctggcatcgagtggcaccgacagg
agactcaacgtctgggatctcagtaaaattggcgaggagcagtcgccggaggacgctgaa
gatggaccccccgaactcctgttcatccacggcggccacacagccaagatctccgatttc
tcctggaaccccaacgagccctgggtcatctgttcggtgtcagaagacaacatcatgcaa
gtgtggcagatggctgagaacatttacaatgacgaagacccagagggaacagcagatgca
gaagtacaaggatga
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integrated database retrieval system
