Lepisosteus oculatus (spotted gar): 102682247
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Entry
102682247 CDS
T07349
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
loc04514
Cell adhesion molecules
loc04672
Intestinal immune network for IgA production
loc04810
Regulation of actin cytoskeleton
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102682247 (itga4)
04514 Cell adhesion molecules
102682247 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102682247 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102682247 (itga4)
04810 Regulation of actin cytoskeleton
102682247 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
102682247 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102682247 (itga4)
04515 Cell adhesion molecules [BR:
loc04515
]
102682247 (itga4)
04090 CD molecules [BR:
loc04090
]
102682247 (itga4)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102682247 (itga4)
Exosomal proteins of other cancer cells
102682247 (itga4)
Cell adhesion molecules [BR:
loc04515
]
Integrins
Integrin alpha subunits
102682247 (itga4)
CD molecules [BR:
loc04090
]
Proteins
102682247 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
102682247
NCBI-ProteinID:
XP_015214473
Ensembl:
ENSLOCG00000006512
LinkDB
All DBs
Position
LG12:14182065..14222083
Genome browser
AA seq
1044 aa
AA seq
DB search
MQSEFFKCMCLLNRYFLISMDQKKLEEVHSWFIVLKVACFFYLVSKAECYNLDIENHVIF
NGPKGSLFGYSVLLHSHENQNWLLVGAPIANSSSNQAIVNPGAIFKCNINDINHCEQLPV
GIEEDNSCGRHCLAEKDNQWLGVSLSRQSEEGYIVACGHRWKNVFYMHKENQHKLPHGIC
YKISPDLTFQQTLTPCYKDHQRKFGESYGSCQAGISNYLTKDLIIMGAPGTFYWTGSVLV
YNMSSRSLWAYVDNENHVLFGSYLGYSVGAGHFSHPDSTEFVGGAPQHGQTGKAYILSFG
STSTLEIIFELSGKMLGSYFGASVCAVDLNSDGLSDLLVGAPMHSTVREEGRVYVYMNLG
KAKLQELEFELVGSDMYSARFGETITNLGDIDDDGFPDVAIGAPQEEDLQGAIYIYNGRK
RGISQTFSQKITGSIIGNAFKMFGQSVSGRIDVDGNGYPDVAVGAFLSDSAIVLRTRAVV
IVEVSMILPPSVNRTKPACTENGKPAVCMNVTLCFQIKGRYIPGYIGLLYNLTADVLRKE
GFPYRFYFIGNGTSNGTSGKINALHNRMSCVTHQAYMRKEVRDIFTPIQFEATYQLGEHK
VNKRDSSHLQDLKPILQQREGDNNIVSNKTMFARYCVWPNCSTNLRVSAGLVLPQSHKGK
SYFALGNGKTIMLNVSLFNAGDDAFQAALHIRFPNMLYFIKVLDSEEKHISCEITEQEQP
TVGLDCSVGNLYINSLTRVNVSFLLDVNRNSSAGDLTITVNATSDNAEDTNLQHDNFVSL
VLPLRYGVDLNVHGFVSPSLFVFGEEKEGPCYSEKFNYTFSVINVGLSKSPDTKFKISLP
NSLAPHPYQLFNALDIRSSLGQCHLLNVINKTDDDKCDLPKATFLEDVVFFFSKTGKRFM
YCMEEDDLCLNIICEFGEMDIGKEAIVYLEVELNPSVLELSPGRAPVMRIQTTATAFPKN
DPYIIKLQDNPFTTIVLEAHHDYKPRHGVGLFIISGSLLIGLVILGLLTYILWKVGFFKR
KFTTEKEQQRRESWDYVDKIKDDY
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcgagttttttaagtgcatgtgcctcttaaatagatattttcttataagtatg
gatcaaaaaaagttagaagaagttcatagctggtttatcgtattgaaagtggcgtgcttt
ttttatctagtcagcaaagccgaatgctacaatctggatatagagaatcatgtaattttc
aatggaccaaagggatctctgtttggatattcagttttgctacacagtcatgaaaatcag
aattggttgttagtgggagctccaattgctaattcaagtagtaaccaagccatcgtcaac
cctggtgcaatttttaagtgcaacatcaatgacatcaatcactgtgagcagctacctgtc
ggtattgaagaagacaattcttgtggaaggcattgcctagctgaaaaagataatcaatgg
cttggtgttagcttatccagacaatctgaagagggatatattgtggcttgtggacatagg
tggaaaaatgtattttatatgcataaagaaaatcagcataagttgcctcatggtatttgc
tacaaaataagccctgatttaactttccaacagacattgactccctgctacaaagatcat
cagcggaaatttggtgaaagctatggttcctgtcaagctggaatatctaattatctgaca
aaggatttgattataatgggagctcctggaacgttttactggactggatctgttttagtt
tataatatgtcaagccgttctttatgggcatatgttgataatgaaaaccatgtccttttt
ggaagctatttaggctattcagtaggtgctggccattttagccatccagattccactgaa
tttgtgggaggggctccccagcatgggcagactggtaaagcatacatattaagttttgga
tcgacaagtactttggaaattatctttgaattaagcggcaagatgcttggatcttatttt
ggagcttccgtctgtgctgttgacctcaattcagatggactctcagacttgcttgttggt
gcaccaatgcacagtactgttcgagaggaagggcgtgtttacgtgtatatgaatttgggc
aaagctaaactgcaagaattggaatttgaattagtaggaagtgatatgtattctgcgagg
tttggcgaaaccataaccaatcttggagatattgatgatgatggatttccagatgtggcg
attggagctccgcaggaagaagatcttcagggagctatttatatctacaatggaaggaag
agagggatatcacagaccttctctcaaaaaataacaggaagtataatcggtaatgccttt
aagatgtttggccagtctgtatctggacgcattgatgttgatggaaatggttacccagat
gttgcagttggtgccttcctgtctgattctgccatagtactaagaacccgtgcagtggtg
attgtagaagtctccatgattctccctccatctgttaaccgtacaaagccggcatgcact
gagaatggaaaacctgcagtctgcatgaatgtcacactgtgctttcagatcaaaggcaga
tacattccaggatatataggtctcctttacaacctaactgcagatgtcctccgaaaagaa
ggatttccttacaggttttattttattggaaatgggacctccaatggcacatcaggaaaa
ataaatgctttgcacaaccgcatgagttgtgtgactcaccaagcatacatgaggaaagaa
gtcagagatatttttaccccaattcagtttgaggcaacctaccagctgggagaacataag
gtgaataaaagagactccagccatctccaagatctcaaacccatccttcaacagagggag
ggagacaacaatattgtcagtaataagaccatgtttgcacgatactgtgtctggccaaac
tgttccacaaatctgcgggtttcagcagggcttgtcttaccacagtcccataaaggcaag
tcgtattttgcattagggaatgggaagactataatgttgaacgtgagtctgtttaatgca
ggagatgatgccttccaagctgccctccatataagattcccgaatatgctgtattttatt
aaagtcttagattcggaagagaagcatatcagctgtgaaatcactgaacaagaacagcca
acagttggactggactgcagtgtggggaatctgtacattaactctcttacaagggtcaat
gtcagtttcttattggatgtgaacagaaacagtagtgcaggggacctcaccatcacagtt
aatgcaaccagtgacaatgcagaagatacaaaccttcaacatgacaactttgtgagtcta
gtcttaccattgagatatggagttgacttaaatgtccatgggtttgtttcaccatcctta
tttgtgttcggagaggagaaggagggtccttgctattctgagaagtttaattacacgttc
agtgtaattaatgttggtctgagcaaatctccagatactaagtttaaaatcagtttacct
aattccttggcacctcatccataccaattgttcaacgctttggatatcaggagctccctt
ggacagtgtcatctcctaaatgttattaacaagacagacgacgacaagtgtgatttaccg
aaggcaacctttttagaggatgtggtgttcttcttttcgaaaacaggaaaaagatttatg
tactgtatggaagaagatgatttatgtttaaatattatttgtgagtttggagaaatggac
attggaaaggaggctattgtttacctggaagtggagcttaatccttctgttttagaactt
tctccgggaagggcgcccgtaatgcggattcaaacaacagctacagcttttcctaaaaat
gatccttatatcattaaattacaggacaacccttttacaactattgtgttggaagcacac
catgactacaagccaagacatggtgtaggactgttcattatttcaggaagccttcttatt
gggctagtgatacttggactgctaacatacattctttggaaagtgggtttctttaagaga
aaatttacaacagagaaagaacagcaacgtcgagaaagctgggactacgtagacaagatt
aaagatgattattga
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integrated database retrieval system
