Lepisosteus oculatus (spotted gar): 102682249
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Entry
102682249 CDS
T07349
Symbol
sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102682249 (sox2)
Transcription factors [BR:
loc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102682249 (sox2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102682249
NCBI-ProteinID:
XP_015216374
Ensembl:
ENSLOCG00000017346
UniProt:
W5NLE2
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All DBs
Position
LG14:175445..177680
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AA seq
315 aa
AA seq
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MYNMMETELKPPALQANAGGTGNSNSSGNSQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSENEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPSGLLAPGGNTMSSGVGVGAGLGAAVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTSSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHPRAPPCQTGDLRDMISMYLPGAEVPEPTAQSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgaactcaagccccccgccctccaggccaatgctgggggc
acggggaactccaactcttcaggaaactcccagaaaaacagccccgaccgagtcaagaga
cccatgaacgccttcatggtgtggtcgagggggcagcggaggaaaatggcgcaggagaac
cctaaaatgcacaattcggaaattagcaagagactcggggccgagtggaaacttttatcg
gagaacgagaagcgacccttcatcgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaataccgaccgaggcggaaaaccaagactctgatgaagaaagat
aaatacaccctaccgagcgggctgcttgcgcccggcggcaacactatgagctccggggtg
ggtgtaggggctggtttgggagccgccgtcaatcagaggatggacagctacgctcatatg
aatggctggactaacggcggctacggcatgatgcaggaacagctgggctacccgcagcac
cctgggctaaatgcgcataacacggcacagatgcagcccatgcaccgttatgacatgagc
gcgcttcagtacaattccatgaccagttcacagacctacatgaacggatctcccacgtat
agcatgtcctactcccagcaaagcaccccaggaatgacgctgggcagcatgggttcggtg
gtcaagtcggagtccagctcgagtccacctgtagtcacttcgtcttctcatccaagggct
cctccgtgtcagaccggagacctccgggacatgatcagtatgtatttaccaggtgctgaa
gtaccagaaccaactgcccaaagcagacttcatatgtctcaacactaccagagcgcacct
gtacccggtacagctattaatggcacacttccactgtcacacatgtaa
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