Lepisosteus oculatus (spotted gar): 102682300
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Entry
102682300 CDS
T07349
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04080
Neuroactive ligand-receptor interaction
loc04082
Neuroactive ligand signaling
loc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102682300 (gabrg1)
04082 Neuroactive ligand signaling
102682300 (gabrg1)
04519 Cadherin signaling
102682300 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102682300 (gabrg1)
Ion channels [BR:
loc04040
]
Ligand-gated channels
GABA-A
102682300 (gabrg1)
SSDB
Ortholog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102682300
NCBI-ProteinID:
XP_015200827
Ensembl:
ENSLOCG00000012390
UniProt:
W5N3P6
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Position
LG4:55872721..56010554
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AA seq
465 aa
AA seq
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MSFWRFGLETAPWLLRHRRKVPVLWLLAWLGVCAAFGPNKMEEEDYEDVPINKTWVLSPK
VYESDVTLILNKLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQT
WYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWNNGRVMY
TLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEILYRWQRRSVEVADQRYWRLYQF
AFVGLRNTSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCILIVVLSWVSFWINKDA
VPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFT
SNRKAKKTKANNAPKSTVVNIRPGTSLIQMNNIASYQEEDDYAYECLDGKDCASFFCCFE
DCRTGAWREGRMHVRVSKIDSYSRIFFPTAFGLFNLVYWVGYLYL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttggagattcggtctggaaactgcaccttggttgcttcgtcatagaaggaaa
gtgcctgtcctttggctattagcttggcttggagtctgtgctgcatttggaccaaacaaa
atggaagaagaagattatgaagatgtacctataaataagacatgggttttatcaccaaag
gtctacgaaagtgatgtcaccttgatcctgaataagttgctacagggatatgacaacaaa
cttagaccagatattggagtgaggccaacagtaattgagactgccgtgtatgtaaacagc
ataggaccagtagaccccatcaatatggagtataccattgatatattctttgctcagacc
tggtatgatagcagactgaagttcaatagctctatgaagctactcatgcttaatagcaat
atggtgggcaagatctggattccagacacctttttcagaaactcaaggaaatctgatgcc
cattggatcacaacaccaaaccgccttctgaggctgtggaataatggaagggtcatgtat
acattaaggttgacaattaatgcggaatgctaccttaaactacataactttccaatggat
gagcattcctgtccactggagttttcaagctatggctatcctaaaaatgaaatactatac
agatggcaaagaaggtctgtggaagttgcagatcaaagatattggagattatatcagttt
gcattcgttgggctacggaatacatctgatgtggctcacactcaatcaggagaatatgtg
atcatgacaatattttttgatctgagtcgtcggatgggctactttaccattcaaacatac
attccttgcatactgattgttgtgctttcatgggtgtcattctggattaataaagatgca
gtgccagccaggacatcattaggtattactacagtgttgaccatgactactcttagcaca
atttcgaggaagtctttgccaaaagtatcatatgtgacagccatggatctctttgtatct
gtgtgcttcatctttacctttgctgcactgatggagtatggaaccttgcattatttcact
agcaacaggaaagcaaagaaaacaaaagcaaataatgcaccaaaatctactgtagtaaac
attcgaccaggaacttccctaattcaaatgaacaacattgcctcctaccaagaagaggat
gattatgcatacgagtgtctcgatgggaaagactgtgcaagtttcttctgttgttttgaa
gactgtcgtacaggagcttggagagagggacgaatgcatgttcgggtttcaaaaattgac
tcctattcccgaatattctttcctacagcatttggtttgtttaatcttgtttattgggtt
gggtatttgtacttataa
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