Lepisosteus oculatus (spotted gar): 102682413
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Entry
102682413 CDS
T07349
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
loc01009
]
102682413 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102682413 (hdac6)
04131 Membrane trafficking [BR:
loc04131
]
102682413 (hdac6)
03036 Chromosome and associated proteins [BR:
loc03036
]
102682413 (hdac6)
Enzymes [BR:
loc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102682413 (hdac6)
Protein phosphatases and associated proteins [BR:
loc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102682413 (hdac6)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102682413 (hdac6)
Membrane trafficking [BR:
loc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102682413 (hdac6)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102682413 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
102682413
NCBI-ProteinID:
XP_015208373
LinkDB
All DBs
Position
LG1:2817435..2840607
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AA seq
894 aa
AA seq
DB search
MDSIPNPEEAGSRRGSSHSPKSPGSSSKKKSSKPSGQPQGKRTALQEARRKGRMDRSRGE
EEMTAQLRNLVREAYCKESVSSCPFFHPVGSFCQFLFCSWVSVCLPVYRHVECPARVSTI
MEKAQQEGLVSRCVQVEVRDKPPRARSSDSRMPPGLRVWGSSPPPRDLARESAALCSLCG
RCACCTAVVTDRNVTTGPHRESIDRRRPVCPQESFRCARLAAGSLLQLVDEVMASRLRNG
FSVARPPGHHAHVDRMNGYSMFNSVAIAARHARERHGLERFQEDPSVLYFSVHRYEDGCF
WPHLVDSGGTAAGTGAGRGYNINVPWNQVGMKDADYIAAFQQLLLPVAYEFQPQLVLVAA
GFDAVIGDPKGGMAASPQCFSVLTHLLQGLAQGRVLLALEGGYNLQSTAEGACACLRSLL
GDPCPRLAPPGAPCDSGCLAISPYVWLCCSMLRLGCGCPRAPSHHPELPQRIFRIFSRHQ
DLGLLSRCHRIPARHATEEELAMCHRYGGGRGLYWNKPSARLFPTVPETLRASLPSLKQQ
SRRSAEQKGKRLPGQAATPRRSPRLGSQPATPEQGAAPVSPPERGSEEKGRGVQDITQGL
LMLDLDTPSSSPANPSPASLPVGGARRKAKPAPLESSDVIGAGGERSDAAPQPTLEPTEG
RESGDLVLKVESCEVEVGLRGNVTLIRHILLQAYRCEGPLRRTEHVPGGASDPAGGDPAG
DSPGGECGASVRQVVLFLQTGARETGEVQPGSRCAKRRARAAPGAAGVARARRSGAVSPC
PPRQVLCGRYVSGHMVAHGLASGHALVLSFADLSVWCYDCEAYVHNEVGGRPGGGGCSWA
GAGAEGLAFRVWLRNERDFDLCLSVPSFHPSSFPSFVNSFIQPTSYSVSTHRAA
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggattccatacccaatcccgaggaggcggggtctcgtcgaggctcctcccactccccc
aagtccccaggctcctcatccaagaagaagagctccaagccgtctggccagccccagggt
aagaggaccgctctgcaggaggcgcggaggaagggaaggatggacagaagccgaggagaa
gaggagatgaccgctcagctcagaaacctggtacgagaagcttactgcaaggagtcagta
tcgtcctgtccttttttccatcctgtgggctccttctgccagtttctcttctgttcctgg
gtgtctgtctgcttgcctgtgtatcgtcacgtggagtgtcctgcgagagtgagcaccatc
atggagaaggcccagcaggaagggctggtgtcccgctgtgtacaggtcgaggtgagggac
aaaccacccagggcgcggtcctccgacagcagaatgccaccagggcttcgggtctggggc
agttcccccccccccagagatctggccagggaatctgcggctctttgttcgctatgcggt
cgctgcgcgtgctgtactgcagtcgttacagatagaaatgtaacgactggtccacacagg
gaaagcatagaccggcgccgccctgtctgtccgcaggagtcgttccgctgcgcccggctg
gcggcggggtcgctgctgcagctcgtcgacgaggtgatggcgtcgcggctcaggaatgga
ttctctgttgccagacctccggggcaccacgcgcacgtggacaggatgaacggctactct
atgttcaacagcgtggcgatcgcggcccggcacgcccgggagaggcacgggctggagcga
ttccaggaggatcccagtgtgctgtatttctcagtgcatcgctatgaagacgggtgcttc
tggccccacctggtggactcgggcggtactgccgcggggacgggggcggggcgagggtac
aacatcaacgtgccctggaaccaggtggggatgaaagatgccgattacatcgccgccttc
cagcagctgctgctgcctgtggcctacgagttccagccacagcttgtgctggtcgcagct
gggttcgacgctgtgatcggggatcccaagggcgggatggcagccagccctcagtgcttc
tccgtgctgactcacctgctgcaggggctggcccagggcagggtgctgctggccctggag
gggggttataacctgcagtccacagcggagggcgcgtgtgcgtgtctgcgcagtctcctt
ggagacccctgtcccagactggcccctcctggagccccctgtgacagtggctgtttggcc
atctctccttatgtgtggctttgttgttccatgctgcggttggggtgtggatgtccgcgt
gctcccagccaccacccggagctcccccagaggatattccggatcttctcccgtcaccag
gacctggggctgctgtcccgttgccatcggataccagcccgccatgccaccgaggaggaa
ctcgccatgtgtcacaggtacgggggggggagagggttgtactggaacaaaccatcagct
cggcttttccctacagtcccagagaccctgcgagcttctctgccctccctgaaacagcag
agtcgccgctctgcagagcagaagggcaagaggttgccgggacaggcagcgactcctcgc
aggagtccacgcctggggtcacagcctgccaccccggagcagggtgctgcgcctgtgtcg
ccccctgagcgaggaagtgaggagaagggcagaggggtgcaggacatcacacagggtctg
ctgatgctggacctggacacgccctcctcgtccccagccaatccgagcccagcctccctg
cctgtgggtggggccaggaggaaggcgaagcccgcccccctagagagcagtgatgtcatc
ggtgctggaggtgaaaggtcagacgctgcaccccagcccaccctagagccgactgaagga
agagagagtggggatctggtcctgaaggtggaatcgtgtgaagtggaggtgggtctgaga
gggaatgtgacactcatcaggcatattttgcttcaagcttaccgatgtgagggcccttta
agacgcaccgagcacgtccccggaggggcgagcgaccccgcagggggagaccctgcgggc
gacagtcccggaggggagtgtggagcgagtgtgaggcaggttgttctcttcctccagact
ggagcccgtgagacaggggaagtccagcctggaagccgctgtgccaagcgccgcgcgcga
gcggcgccgggagccgcgggggtggcccgtgcgcggcgctcaggtgctgtctccccctgc
cccccgcgacaggtgctctgcggccgatacgtcagcgggcacatggtggcgcatgggctg
gcatcggggcacgcgctggtgctgagcttcgccgacctgtccgtctggtgctacgactgc
gaggcctacgtgcacaacgaggtagggggccgtccggggggggggggctgctcttgggct
ggcgcgggggcagaggggctggcgtttcgtgtctggctgagaaatgaaagagatttcgat
ctctgtctcagcgttccttcgttccatccttcctcctttccttcgttcgttaattcattc
attcagccaaccagttactcagtcagtacacaccgagctgcgtga
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