Lepisosteus oculatus (spotted gar): 102682447
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Entry
102682447 CDS
T07349
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03440
Homologous recombination
loc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102682447 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102682447 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loc03032
]
102682447 (nbn)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102682447 (nbn)
DNA replication proteins [BR:
loc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
102682447 (nbn)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
102682447 (nbn)
BRCA1-C complex
102682447 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
102682447
NCBI-ProteinID:
XP_015213307
Ensembl:
ENSLOCG00000010276
LinkDB
All DBs
Position
LG11:35046585..35064295
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AA seq
787 aa
AA seq
DB search
MPLYSLICTYVGLDINSIILRGTGHSYSLLPGVEYVVGRKNCPILLQNDQSISRLHAVVS
VSSATSSQSQSFTLPTLTVKDTSKYGTYVNDERLSCDTPKVLQPGDRVTFGVFHSKFKVE
NEPMVVCSSCLDSEGKAALSQSVQLLGGRVVHSWSQECTHLVMPSVKVTIKTICALLCCR
PIVTPEYFRELRKAVQLRQQPPEPAGFYPPIEEPSISPEELDLSARPNRKTLFQDKIFVF
LNVKQHKRLGSAVAFGGGQARLLEEGAVPLPLLASAGTCVIEVGEANSQVEESPFAKKWM
DSIARILQRNGLRFISEAEIGLAAVYVATNMYCNPASRISSEAAVTVKPALPSATQSVAV
DETVMSAGTLNITAYAQDTGPSQTCARMDTSGEGLVTETPEKQQRGERSSWERAAVKEAS
GTCTVAESVLADWENEGGQARYPPDPSRATVDNHLTPNKTPSASGSRADSSQSQARPLTL
SKKRDRDNDPTPGLPQAKQVRLTGAEHKASGSSVPQRSDPVKNHPPSPAPSESFLTKRQS
AEETQVMTDCGAGTSKDSELARGSGDANQKSTSRKRKDMTPDCAGSDAVISEAEMEELAS
IMSEPMDEGQDFSVNASKKQKLEPAVKVKQEELSVEENNNKSEVLKPVSQEPVEQERDIK
YKISALKKQTDESRVIKSEETQDFPRNLIVTEFKSLLVIRPTRATADLPQSSNVNGKNFK
KFRKVAFPGTAGLPKIIGGSDLVPHQTKNSELEEWFRQEVVAKSQYEKEDSIADDIFRYE
PKISKRK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgccgttatatagtttaatatgtacatacgtcggtttagacattaacagcattatattg
agaggaacaggacattcctactccttgttacctggtgtggagtacgtggttggtcgcaag
aactgccccatattactccagaatgaccagtccatcagccggcttcatgcagttgtctcc
gtgagcagtgcaacctccagtcagagtcagtcgtttacattacccacattaactgtaaag
gatacttctaaatatggcacatatgtgaatgatgagcgtctatcatgtgacacaccaaag
gttttacagcctggagacagagtgacattcggagtcttccacagcaagttcaaagtggag
aatgaacccatggtcgtctgctcgtcttgtttggacagtgaggggaaggcagctctgagt
cagtctgtacagctgcttggaggtcgtgtggtccacagctggtcacaggagtgcactcat
ctggtcatgccctctgttaaagtcaccatcaagacaatctgtgcgttgctttgttgccga
ccgatcgtgactcctgagtatttccgcgagctcaggaaagcagtccagctcaggcagcag
ccacctgaacctgcaggtttttacccccctattgaagagcccagcataagcccagaagag
ctggatctcagtgcaaggccaaaccgtaaaactctgttccaggacaaaatctttgtattc
ttaaatgtcaagcagcacaagaggctcggttctgctgtggcctttgggggaggccaggcc
agactgcttgaggagggagccgtgcccttgcctctgctggcctcagcgggaacttgtgtt
attgaagtgggggaggcaaactctcaggtggaggagtccccatttgcaaagaagtggatg
gattctattgcacgtattctgcagaggaatggacttcggttcatttctgaggcagagatt
ggacttgctgccgtctatgtcgccacaaacatgtactgcaatccagcatccaggatcagt
tcagaagccgccgttacggtgaaaccagcccttcccagtgcgactcagagcgtggcggtg
gacgagaccgtcatgtctgccggcacgttgaacatcacggcctacgctcaggacaccggg
ccctctcaaacctgtgccagaatggacacaagtggcgaaggcctggtgacggagacgccg
gagaagcagcagaggggcgagaggtcgtcgtgggaacgtgctgcggtgaaggaggcctcg
ggcacttgcactgttgcagagtctgtgctggcggactgggagaatgaggggggtcaggcc
aggtatccccctgatccgtccagagccacagtcgataatcacctgaccccaaacaagact
ccttcggccagcgggagcagagccgattcttcacagtcgcaggccaggcccctaaccctg
agtaagaagagggatcgcgacaatgatccgaccccaggcttgcctcaagccaaacaagtc
aggctgactggcgcagagcacaaagcatcaggatcctctgtccctcagcggagtgaccct
gtaaaaaaccacccgccgagtccggcgccgtctgaatccttcctcacgaagcgccaatca
gcggaggagacccaggtcatgacagattgtggtgcggggacgtccaaggactctgagctg
gcccgcggatctggcgatgccaaccagaagtcaacatctagaaagaggaaagacatgacc
cctgattgtgctggatccgatgctgttatttcagaagcagagatggaagagttggcgtcg
atcatgtccgaacccatggatgagggccaagatttctcagtgaatgccagcaagaaacaa
aaactagagcctgcagtaaaagtcaagcaggaagaattaagtgttgaagaaaacaacaat
aagtcggaggtcttgaagccagtttcccaggaaccagtggagcaggaaagggacatcaaa
tacaagatctccgctctaaagaaacaaactgatgaatctagagtaattaaaagtgaagag
actcaggactttccacgcaacctcattgtgactgagtttaagtcccttctcgtcatcaga
ccgacaagagcaactgcagacctgccacagtcaagcaatgtgaacggaaagaactttaag
aagttcagaaaggtggcttttcctggaactgcaggccttcccaaaattattggggggtca
gacctcgtacctcatcagacaaagaactccgaactagaagaatggttcaggcaggaggtt
gtggcaaaaagccagtatgaaaaagaagactcgattgcagatgatatcttcaggtatgaa
cccaaaatctcaaaaagaaagtga
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