Lepisosteus oculatus (spotted gar): 102682453
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Entry
102682453 CDS
T07349
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102682453 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102682453 (trip12)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102682453 (trip12)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
HECT type E3
102682453 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
Motif
Other DBs
NCBI-GeneID:
102682453
NCBI-ProteinID:
XP_015216680
Ensembl:
ENSLOCG00000008188
LinkDB
All DBs
Position
LG14:15801449..15841863
Genome browser
AA seq
2063 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAAAQPQDEAVGGRLQSEQVNHKANTPPENRRPISKASKVQ
SNTVSGKSRGHSSRRSGISSSAPLVQQEDPDTASTSERDKTGQTSKRDGSRGFKRSSGPE
NKGSYSPSPAKKPKALQPPESSSEAKRGQAKSKKRQLAQDQQLKPEQSASTSKAHSRKSG
ATGGSPSQKRKKIDISSNLNSGSGAHSTRPEERPAKPTKLASKSVTSAKAGCSTVTDSSS
SASTSSSSSTAASTAVPQGARVKQGKDQNKARRSRSASSPSPRRSSREKEQNKTAGSSKF
EWAARFSPKVNLPKPKLSLPGSSKSETAKPGPSGLQAKLASLRKSTKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADSDNNQDGANPSAARTDEAPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATGDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKVKKLQVIQFIDVAEQALTALEMLS
RRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVSDSLPLLTQR
LTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIM
VVRMFSLMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVPRSPQELYELTSL
ICELMPCLPREGIFAVDTMLKKGNTQNTDGAIWQWRDDRGLWHPYNRIDSRIIETAHQNG
EDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANPNTSGHLEVKKEDARAQL
MKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAV
SSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETFLTSP
PKACTSGSGSLCTTTISTAATTAATNVAPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLSTQTNSTNSEP
ARTAGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDASNPALNVLQRLC
TATEQLNLQVDGGIECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSNNDKDAVSRDV
RLKRFLHVFFGCPVPGTESPGRTDPTENGPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGR
IREEDEDSDDDGSDDEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQFSIQ
AEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDVVGGKRGRAQTAPTKTSPR
NAKKHDELWHDGVCPSVTNPLEVYLISEPPESITFDDPSLDVILLLRVLHSISRYWFYLY
DNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPSWLTELGKTCPFFFPFDTRQM
LFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVMQDL
GSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGNQEGTKY
IFSSRGLFAVPFGRTTKPAHIAKVKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRH
ESSITSHDLVNIDPGVAKSIHHLEDIIRQKKKLEQDRSHTRETLQQALESLTMNGCSVED
LGLDFTLPGFPNVELKKGGKDIPVNIHNLEEYLRLVVYWTLNEGVSRQFESFREGFESVF
PLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVKFLFEVLSSFDAE
QQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYS
SIEIMREKLLIAAREGQQSFHLS
NT seq
6192 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctgcggcccagccacaagacgaagcagtcggaggaaggttgcagtcagagcaggtaaat
cataaagcaaatacccctcctgagaatagaagacctatttctaaggcttcaaaagtgcaa
tccaacactgtctctggaaaatccagagggcacagctctagaagaagcggtatttcgtcg
tcggcaccattagtgcagcaagaagacccagatacagctagtacttcagagagagacaaa
acaggacagacgtccaagagagacgggtcccgtggatttaaacgtagttcaggtccagaa
aataagggttcatactctcccagccctgccaaaaagcccaaagcacttcagccccctgag
agctcttcagaggcgaagagaggacaagctaaatctaagaaaagacagttggcgcaagac
cagcagctgaaacctgagcagtctgcatcaacgagcaaggcccacagcagaaagagtgga
gctactgggggatccccgtctcagaaaagaaaaaagattgatatttcctccaatttaaat
agtggttctggggctcattcaacccgtcctgaggagaggcctgcaaaacccaccaagctg
gcttcaaaatcagtgacctcagccaaagctgggtgtagcactgtcacggattcttcctct
tcagcctccacttcctcttcttcctccactgctgcctccacagccgtacctcagggcgcc
cgggtgaaacaagggaaagaccagaacaaggcccggaggtcccggtccgcctccagcccc
agcccgcgcaggagcagtcgcgagaaggagcagaacaaaactgctggctcctccaagttc
gagtgggctgcccgcttcagcccgaaagtcaatttgcccaaaccaaaactgtctctgccg
ggctcttctaagtcagagactgcaaagcctgggccttcgggacttcaagccaaactagca
agcttaagaaagtctacaaagaagcgcagcgagtccccaccagcagagctccccagttta
aggcggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcgaggctct
ggcctgggcaaacgcggggcagctgaagcccgccgacaggagaaaatggcagattctgac
aacaaccaggatggagccaatccttcagctgcacgcacagatgaggcacctcaaggagca
gcagcttctagctctgtggctggggctgtgggaatgacaacatctggagagagcgaatcg
gatgactcagaaatgggcagactacaagctctccttgaggcacggggtcttcctcctcat
ctgtttggtcctctgggtcctcggatgtcccagctattccacagaacgataggaagtggg
gcgagttccaaggctcagcagctccttcagggcctgcaggctacaggtgatgagtctcag
cagctccaggcagtcattgagatgtgccagctactggtgatgggcaatgaggaaacgttg
ggtggatttccagtgaagagtgttgtaccagcattgataaccttgttgcaaatggagcat
aattttgacattatgaaccatgcatccagagctttgacttacatgatggaagcgctgccc
agatcatcagctgtggtggttgatgctattccagtcttcctggaaaaggttaaaaaactc
caagtcatacagtttattgatgtagctgagcaggccctaacagctctggaaatgttgtca
cgtagacatagcaaggccattctgcaagctggagggttggcagactgtttgctttacctt
gagttcttcagcattaatgcacaacgaaatgctctggctattgctgccaattgctgccag
agtatcactcctgatgagtttcactttgtttcggattcactgcccttactaacacaaagg
ctaacccatcaggataaaaaatcagttgaaagcacttgtctctgttttgcccggcttgta
gacaactttcagcacgaagagaacctgctgcaacaggtagcatctaaggatctgctgact
aacatccagcagctcttggttgtgactcctcctatcttgagctcaggaatgttcattatg
gtggtacggatgttctccttgatgtgttccaattgccccagcctggctgtgcagctcatg
aaacagaatatagcagaaactctgcgctttctcctctgtggtgcttcaaatggcagttgt
caggagcagattgacctggttccaaggagtccccaggaactttacgagctgacgtctctt
atttgtgagctcatgccatgccttcccagagagggcatctttgcagtagacacaatgctg
aaaaaaggaaacactcaaaacacagacggtgctatctggcagtggagagatgacagaggc
ttgtggcatccttataacagaattgacagtcggataatagagacagctcatcagaatggt
gaagacgaaattagcttgtccacactcggacgtgtttatactattgattttaattctatg
cagcagatcaatgaggatacaggaacggcgcgagccattcagagaaaacctaacccttta
gccaaccccaacactagtggacatttggaagtgaagaaggaagatgctagggcacagctg
atgaaagaagaccccgaactggcaaaatgctttataaagactttgtttggtgtcctttat
gaagtgtacagctcctcagctgggcctgcggtcagacacaagtgccttagagcaattctt
aggattatttattttgcagatgcagaactcctaaaagatgtgctaaaaaaccatgctgta
tctagtcacattgcttccatgctgtcaagtcaagatctgaagatagttgttggagccctt
caaatggcagaaattttaatgcaaaagttgcccgatattttcagtgtttactttagaaga
gaaggtgtaatgcaccaagtaaagaatctggcagagtcggagactttcctcactagtcct
ccgaaggcttgtacgagtggttctggaagtctttgtacgacgacaattagcacagcagcg
actactgctgccaccaatgtggctcctgacctgggctctccgagcttccagcacagcatg
gatgattctctggacctgagtccccagggccggttaagtgatgttttgaagagaaaacgt
ctaccaaagcgagggccaagaaggcccaagtattcaccaccaagggatgatgacaaagtt
gacaatcaagctaaaagtcctactactacacagtcccccaaatcgtctttcttggcaagc
ttaaacccgaaaacatggggtaaattaagtactcaaactaacagcaccaactctgagccg
gcacgcacagctggtgtcagtgggcttgcccgggctcctcctaaggactccatttctaat
aacagggataagatcaaggcttggataaaggaacaggccagtaaatttgtcgagcgctat
ttcaactctgagaatgtggatgcaagcaatcctgcattgaatgtactacagaggctttgc
actgctactgaacagctcaacctgcaggtggatggtgggatcgagtgccttgtagaaatc
cggagtatagtctcagagtctgatgtgtcctcctttgaaatccagcacagtggatttgtg
aaacagctgctgctttacttaacctctaacaatgacaaagatgctgtcagtcgagatgtt
cggttaaagagatttctacatgttttttttggctgtccggttcctggcacagagtctccc
ggacgaacagatcccacagaaaatggacctcttttggctcttgtgcacaaaatgaacaat
tgtttaagtcaaatggaacagtttccagttaaagtacatgacttccccagtggcaatgga
actgggagcagaggatctcaggctctgaagttctttaacacccatcagctgaaatgtcag
ctgcagagacatccagactgtaccaatgtgaagcagtggaagggaggtccagtgaagatt
gatccattggctttggtacaagctattgaacgataccttgttgttagaggctacggacga
attcgagaggaagatgaagacagtgatgatgatggttcagatgatgaaattgatgagtca
ctggctgcacagtttctgaattctggaaatgtgaggcacagactccagttttacattgga
gaccacttactgccatacaacatgactgtataccaggctgtcagacagttcagtatacag
gctgaagaggagcgggagtccacagatgatgagagcaaccccttaggaagagcaggaatt
tggacaaagactcacacaatatggtataaacctgtgagagaagatgaagatggcaataag
gacgtagttggtggaaagagaggccgtgcacaaactgccccaacaaaaacttcacctcgc
aatgcaaaaaaacacgatgaactgtggcatgatggtgtttgtccttcagttacaaacccg
ttagaagtttacctcatttccgaacctcctgaatccataacttttgatgacccttcactt
gatgtgatcctcctgttaagagttctccattcaataagcagatactggttttacctgtat
gataatgctgtatgcaaagagattattcccaccagtgagtttatcaacagcaagctcaca
gcaaaagcaaatcggcagcttcaggatcccttggttataatgacagggaatataccctct
tggctgacagagcttggaaaaacctgccctttcttcttcccatttgacaccagacaaatg
ctattctacgtgacagcttttgatagggaccgagccatgcagagattattggacacaaat
ccagaaattaatcagtctgattcccaagacagcagagttgcaccaagactggatagaaaa
aagcgcactataaaccgcgaggaattactgaaacaagctgaatcagtaatgcaggatctt
ggcagctccagagcgatgctggaaattcagtatgaaaatgaagttggaactggcctgggc
ccaacattagagttttatgcacttgtatctcaggaactgcaaagagctgatcttggtttg
tggagaggagaagaagtcaccttatcaaacccaaaaggaaaccaagaggggaccaagtat
atctttagctctcggggtctgtttgctgttcctttcggaaggacgaccaaaccagcacac
atagccaaggtcaagatgaaattccggtttctgggaaaactgatggcaaaagccataatg
gacttcagattgttggaccttcctctgggactgcctttttacaagtggatgctgcgtcat
gaatcctctattacctcccatgacctcgtaaacattgatcctggcgtagctaaatcgatc
catcaccttgaggatatcatcagacagaaaaagaaactggagcaggataggtcacatacg
agggagaccctgcagcaagcgctggaaagcctgacaatgaatggctgctcagtggaagac
ctgggacttgatttcactctgcctggttttcccaacgttgagttaaagaaaggaggcaag
gatattccagtcaacatccacaatctggaggaatatctgagattggtggtttactggact
ttgaatgaaggagtttccagacagtttgagtcattcagggaaggatttgagtcagtcttc
cctctgcatcacctgcagtatttttatcctgaagagctggatcagttgctttgtggtagc
aaatctgagacttgggatgtaaaaactttaatggagtgctgtagaccagatcatggatat
acacatgacagtcgtgctgtgaagttcctgtttgaagtcctcagtagtttcgatgcagaa
cagcaaagactgtttctgcagtttgttaccggtagcccaagactgccagtgggaggcttc
aggagcttgaatcctccgctgacgattgtgcgcaagacgtttgaatctacagagaatccg
gacgattttctgccctctgtaatgacctgtgtcaactatctcaagctacctgactactcc
agtattgagataatgcgtgaaaaactgttgatagctgccagagaagggcagcagtcattc
catctctcttga
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