Lepisosteus oculatus (spotted gar): 102682569
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Entry
102682569 CDS
T07349
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04080
Neuroactive ligand-receptor interaction
loc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102682569 (gabra1)
04082 Neuroactive ligand signaling
102682569 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102682569 (gabra1)
Ion channels [BR:
loc04040
]
Ligand-gated channels
GABA-A
102682569 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102682569
NCBI-ProteinID:
XP_006631878
Ensembl:
ENSLOCG00000010698
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Position
LG6:complement(28868530..28896182)
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AA seq
476 aa
AA seq
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MPRSVSSNRSAEFNFQLTEPAMGQTGILIKCTWALLLIVHVLWGKSYGQSSSDDQKDNTT
VFTRILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDE
RLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKEDGTLLYTMRL
TVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAKSVVVAEDGSRLNQYDL
LGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVP
ARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKR
SYAWDGKSVVPEKQKKKKESLIKKNNTYTATATNYAPNIARDPGLATIAKSAAPPTEAKE
DPKPKPPEAKKTFNSVSKIDRMSRIAFPLLFGTFNLVYWATYLNREPQIKGLFQPH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctcagtttcatcgaaccgttctgcagagtttaattttcagttaacagaacca
gcgatgggacaaactggcatattgattaaatgcacatgggccctccttctaatagtacat
gtgctatggggaaaaagttatggacagagctcatcagatgatcagaaggacaacaccact
gtgtttaccaggatcctggatagtctattggatggatatgacaatcgtctgagaccaggg
ctgggagagcgtgtaactgaagtcaagactgacatttttgtgacgagttttggacctgtc
tcggaccatgacatggaatacacaattgatgtattttttcgacaaagctggaaggatgag
cgattaaagttcaagggtcctatgacagtcctccgtctaaataatctgatggcaagcaaa
atctggacaccagacacattcttccacaatgggaagaaatcagtggcacacaacatgacg
atgccaaataaactactacgcattaaagaagatggtacacttctatatactatgaggcta
actgtaagggcagagtgcccaatgcatttagaggacttcccaatggatgctcatgcttgt
cctttgaagtttggcagttacgcctacactcgagcagaggtggtatatgtgtggacacga
ggtgcagcgaagtctgtagtcgtggcagaagatggctcaagactcaaccaatatgactta
ctgggtcaaacagttgactcaggtattgttcagtccagcacaggagagtatgttgttatg
actacacattttcatttaaagaggaagattggttactttgtcatccagacatatttacca
tgtataatgacagtgatcctgtcccaggtgtcattctggctcaacagagaatcagtccct
gctagaactgtatttggtgtaacaaccgtactgaccatgacaaccctgagtattagtgcc
aggaattctcttccaaaggtggcatatgcaacagccatggactggtttatcgcagtttgc
tacgcatttgtcttctcagccctcattgagttcgccacagtgaattatttcacaaagagg
agctacgcctgggatggcaaaagtgttgtgcctgagaagcaaaagaagaagaaagaatcc
ctcatcaagaaaaacaacacctacactgcaacagcaacaaactatgccccaaacattgcc
agggatccaggcttggctaccattgccaaaagtgctgcccctcccactgaagctaaagaa
gacccaaaacccaaacctccagaagctaagaaaacctttaacagtgtgagcaaaattgac
aggatgtccagaatagctttccctctactttttggaacctttaatttagtttactgggca
acctacttaaatagagagccacaaatcaaagggttatttcaacctcactaa
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