Lepisosteus oculatus (spotted gar): 102682630
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Entry
102682630 CDS
T07349
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102682630 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102682630 (exosc9)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102682630 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102682630
NCBI-ProteinID:
XP_015199391
Ensembl:
ENSLOCG00000002999
LinkDB
All DBs
Position
LG4:complement(8691373..8707532)
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AA seq
282 aa
AA seq
DB search
MRETPLSNCERQFLLTAIKEKKRLDGRQTYDYRNIKITFGTQYGCCIVDLGKTRVLAQVS
CELVAPKENRPTEGILFFNLELSQMASPAFEPSRQSELLVKLNRQLERCLRNSKCIDTES
LCVVSGAKVWQVRVDVHVLNHDGNIMDASSIAAITALCHFRRPDVCVQGEEVTVFTPEER
DPVPLSIYHMPICVSFSFFEQGTYLLVDPCEREERVMDGLLVIAMNKHREMCSVQSSGGI
MLLKEQVLRCSKIASVKVAEVTELINKALENDKKARYVFEFL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaacgccgctgtccaattgtgaacgacagttcctcctgacagccataaaagag
aaaaagcgcctagatggaagacaaacgtatgattacagaaatatcaagatcacctttggt
acacagtatggatgttgcattgttgaccttggaaaaacaagagtgttggctcaagtttcc
tgtgaacttgtcgctccgaaagaaaatcgcccaacagaaggaattctctttttcaacctg
gagctatcacagatggcttcccctgcttttgaacctagcaggcagtctgagttacttgtg
aagttaaacagacaacttgagaggtgtctgaggaattcgaagtgcatagacacggagtcg
ctgtgtgtggtgtcgggtgcgaaggtgtggcaagtccgagtagacgtgcatgtgttgaac
catgatggtaacatcatggacgcttccagcatcgctgcaatcacagccttgtgtcacttc
agaaggcctgatgtctgcgtccaaggagaggaggtcactgtgttcaccccagaagagaga
gatccagttccattaagcatctaccatatgcccatttgtgtcagtttttcattctttgag
caagggacctatttgttggtggatccctgcgaacgtgaggagagggtgatggatgggttg
ctggtaatagcaatgaacaaacacagagaaatgtgctctgtccagtccagtggaggaatc
atgcttctgaaggagcaagttctaagatgcagtaaaattgccagtgtcaaagtagcggag
gtaacagaactaatcaacaaagctctggaaaatgataagaaagccaggtatgtgtttgag
tttctgtaa
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