Lepisosteus oculatus (spotted gar): 102682673
Help
Entry
102682673 CDS
T07349
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102682673 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102682673 (vps35)
Membrane trafficking [BR:
loc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
102682673 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
102682673
NCBI-ProteinID:
XP_015223857
Ensembl:
ENSLOCG00000005504
UniProt:
W5ME32
LinkDB
All DBs
Position
LG23:10934607..10950251
Genome browser
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPEEETTGDINDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVEKYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQHVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPVFEYFDYESRKSMSCYVLSNTLDYSTEIVLQEQVDDILNLVSTLIQDQPDQPAEDPD
PEDFGEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKNGEEIHDGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIFFFEKENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLR
KESPEADGPNYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtctccacaagatgagcaggaaaagcttcttgatgaagctatt
caggctgtcaaggttcagtcttttcagatgaaacgctgcctggacaagaacaagctcatg
gatgccctgaaacatgcatccaacatgcttggcgagttacgaacctctatgctgtctcct
aagagttactatgaactctacatggcaatctctgatgaactgcattacctggaggtttat
ttgactgatgagtttgctaagggcagaaaggtggcagatctatatgagcttgtccaatat
gcaggaaatattatcccccgcctttacttgctgatcactgtgggtgtggtgtatgtgaga
tcatttcctcagtctcgcaaggatatcctgaaagacttggtggaaatgtgcagaggagta
caacatcccctccgaggtcttttccttcgaaactacctactccagtgcacaagaaacatt
ttgccggatgatggggaacagcctgaagaggagacgactggagatataaatgactcgatg
gactttgtactcctgaactttgcggagatgaacaaactgtgggtgcgaatgcagcaccag
ggccacagccgggaccgtgagaagagggagagggagcggcaggagttgagaatccttgtt
ggaaccaacctggttcggctgagccagctagagggtgtcaatgtggaaaaatacaaacag
attgtgctgcctgggatcttggagcaggtagtcaattgcagagacgccctggctcaggaa
tacctcatggaatgtattattcaggtttttcctgatgagtttcatttgcagactctcaac
ccattcctgcgtgcctgtgctgagctacaccagcatgttaatgtcaaaaacatcattatt
gcattgattgacagacttgctttatttgctcacagagaggatggccctggtattccggca
gatattaaattgtttgatattttctcacagcaagtagctacagttatacagtcacgacag
gacatgccttctgaggatgtggtttcattgcaagtgtccctcattaacttggcaatgaaa
tgttatcctgaccgtgtggactatgttgacaaagttttggagacaactgttgaaatattt
aacaaattgaaccttgaacatatcgccaccagcagtgcagtatcaaaagaactgacaagg
cttttgaagattccagttgacacctacaacaacattctgacagtactaaagctaaaacac
ttccatccagtgtttgagtactttgattatgagtcgaggaagagcatgagttgctacgtc
ctaagtaataccctggattacagcactgagattgtcttgcaggaacaggtggatgacatc
ctgaacctggtctcgacactgatccaggaccagcctgaccagcctgctgaggaccctgat
cctgaggattttggcgaggagcagagccttgtgggaaggtttattcatcttctgcactct
gaggacccagaccagcaatatttgattttaaacacagccaggaaacactttggtgctgga
gggaatcagaggattcgcttcacactaccccctttggtatttgcagcttatcagttggct
ttccgttacaaagagaactccaaagtggatgacaagtgggagaagaagtgtcagaagatt
ttttccttcgcccaccagaccatcagtgcactgatcaaggctgagctggctgaactgccc
cttcggctgttcttacagggggcactggcagccggggaaattggctttgagaaccatgaa
actgtggcatacgagttcatgtcacaggccttttccctttacgaggatgaaatcagtgat
tctaaggcacagctagcagcaatcactttaataattggaacatttgaaaggatgaaatgt
ttcagtgaagagaatcatgaacctttgaggacacagtgtgcactggcagcttccaaactc
ctgaagaaaccagaccaatgtcgcgctgtcagcatctgtgcacatctcttctggtctggc
agaaacacagataagaatggagaagagattcatgatgggaagagagtaatggagtgtttg
aagaaagccctaaagatagccaatcagtgcatggacccatcattgcaggtccagctcttt
atcgaaatcctaaacagatacatctttttcttcgaaaaagaaaatgatgcggtcaccgtg
caagtcctcaaccaactcatccagaagataagagaagatcttccaaacctagaggcaagc
gaggaaacagagcaaattaacaaacactttcacaacacactggagcatttgcgcctgcgg
aaagagtctcctgaagctgatggaccaaattatgaaggtcttgttctgtag
DBGET
integrated database retrieval system
