Lepisosteus oculatus (spotted gar): 102682866
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Entry
102682866 CDS
T07349
Symbol
grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04020
Calcium signaling pathway
loc04080
Neuroactive ligand-receptor interaction
loc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102682866 (grin3b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102682866 (grin3b)
04082 Neuroactive ligand signaling
102682866 (grin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102682866 (grin3b)
Ion channels [BR:
loc04040
]
Ligand-gated channels
Glutamate (ionotropic)
102682866 (grin3b)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102682866
NCBI-ProteinID:
XP_006640004
Ensembl:
ENSLOCG00000001847
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Position
LG19:complement(3398824..3457068)
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AA seq
1093 aa
AA seq
DB search
MDLIFSRFLVYFYFGFQIVLHTYIDPGHPHPQPCHILARIGHTVRLGALLPTGQPARVLT
ALNRALASLSQSRDNFLPYNLSLEVLPREPHDGDPESLFRCVCQAIVVQGVSAVLAFPQT
PDELIQVEFMSSVLEIPFVSIMEQGEPLKTRNPFHLQMLTRSPPSALAELLLTVLQTSGW
QEGTTVLCRGWEQTGVLEVLQLQSRPGARWHLRAALNLTGTAEEEEGAVAHFLSLHFRQT
KPPPASVLLFGADPQCAATVLSSAQDLGLTLPTVHWLLGYPLSPDALHTIGLPLGLLAYG
EVDRKPLDFYIIDALELIGRAVSAATRLRPELALIQDMVNCYDKTGKKGSLSSGQYLSRF
LANTSFSGLTGPVKVLSNASLILPFHRFHIWSLRRDALGHPAWVTVGSWQGGRLEVEEQG
LWHGQSPRPQTEASGGRRGGRWDGGLLGKGSRLRVVTLVEHPFVFTRDVDEDGSCPAGQF
CLNPRTNSSDTLDRLFRELGQGNSTFLPADFRKCCYGYCIDLLEKLAEDLHFEFDLYIVG
DGKYGAWKNGRWTGLVGDLLSGAADMAVTSFSINSARSKVMDFTSPFFSTSLGILVRSKD
TAAPIGAFMWPLHWSMWVGIFVSLHVTALFLTLYEWKSPFGMTPHGRNRMKVFSYSSALN
LCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGIH
DAKLHHPSRGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTTPDGVATLKTDPPQLDA
FIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNVSEFISRYKSDGFMD
MLHDKWYKVVPCGKRVFAVTETLQMGIHHFSGLFVLLSVGVGGALLTLVGEHAFYRLILP
HIRRRQKFKYWLHTSQKIHRALNMTYEDVKRQRATAEKRCNLQKLLPQQPAPAPPPAPAK
WNNECREGSREVKDNKRVHFNLETLNTRGLLARAGAGERGGGGGGGGGGESVVQVCENGG
PALPPPSSSSSSPARASELQELQERIEEIRGQLRVALARRAELQTSLAKEKACPRPEPEV
TSTSPSKDTNAKR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggatttaatcttctccaggttcttggtatacttttacttcgggttccaaatcgtcctc
catacctatatcgaccccggtcacccccatccccagccctgccacatcctggcgcggata
gggcacactgtgcgtttgggtgcgctgctacctaccggtcagccggcccgggtgctaact
gctctcaaccgcgccctggccagcctgtctcaaagtcgggacaacttcctcccttacaac
ctgagcctcgaggtgttgccgcgggagcctcacgacggagacccggagtccctcttcagg
tgcgtctgccaagctatcgttgtgcagggggtctccgcggtgctcgccttcccccagacc
ccggacgagctgatccaagtggaatttatgtcttctgttttggaaatccccttcgttagc
atcatggagcagggcgagcccctgaaaacccggaacccgttccacctgcagatgctgacc
cggagccccccctccgccctggcggagctgctgctgacggtgctgcagaccagcggctgg
caggagggcaccacggtcctgtgccgcggctgggagcagacgggcgtgctggaggtgctg
cagctgcagagccggccgggggcccgctggcacctgcgggcggcgctcaacctgacgggc
accgcggaggaggaggagggcgcggtggcgcacttcctgtccctgcacttccgccaaacc
aagccccccccggcctcggtgctgctgttcggcgccgacccccagtgcgccgccacggtc
ctcagcagtgctcaggacctcgggctgaccctgcccaccgtacactggctcctggggtac
ccgctgagccccgacgccctccacaccatcgggctgcccctcggcctgctggcctacggg
gaggttgaccggaaaccgctggacttctacattatcgatgccttggagctcattgggaga
gcagtgtccgccgccacgagactccgcccagagcttgccctcatccaggacatggtcaac
tgctatgacaagactgggaaaaaggggtcactctcctcgggccagtacttatccaggttc
ctggctaacacctccttcagcgggctgacgggccccgtgaaggtgctgtccaacgcctcc
ctgatcctccccttccatcgattccacatctggagcctgcggcgggacgctctcgggcac
cctgcctgggtgacggtgggcagctggcagggcgggcgcctggaggtggaggagcagggc
ctgtggcacgggcagtcgccacgcccccaaacggaggcgtcgggagggaggagagggggg
cgctgggacggggggttgctggggaaggggagccggctgcgggtggtgacgctggtggag
cacccctttgtcttcacccgggacgtggacgaggacgggagctgcccggccggccagttc
tgtctgaatccccggaccaacagctcggacactctggaccgtctctttcgggagctcggg
caggggaacagcaccttcttgcccgcggatttccgcaagtgctgctacggatactgcatt
gacctgttggagaagctggccgaggacctgcacttcgagtttgacctctacatcgtgggc
gacggaaaatacggggcctggaagaacgggcgctggaccgggctcgtgggagacctcctg
agcggggcggcggacatggccgtcacgagtttcagtatcaactcggcccgcagcaaagtg
atggacttcaccagccccttcttctccaccagcttgggcatcctggtgaggagcaaggac
accgctgcccccatcggtgcgttcatgtggcccctgcactggtccatgtgggtgggcatc
ttcgtgtccctgcatgtcaccgccctcttcctcaccctctacgagtggaagagccccttc
ggtatgaccccgcacggacgcaaccgcatgaaggtcttctcctactcctctgccctcaac
ctgtgctatgccatcctcttcgggcgcactgtctcaagcaagacgcccaagtgctggaca
ggccgtttcctcatgaacctgtgggccatcttctgcctgctggtgctctccagctacact
gccaacctggcagctgtcatggtgggcgagaagaccttcgaagagctctcgggcatccat
gatgccaagcttcaccacccctcccgcgggttccgcttcggcacggtgcgggagagcagc
gccgaagactacatgaagaagagttttcccgagatgcacgagtacatgaggcggttcaac
gagcccaccactccggatggtgtggccacgctcaagacagatcctcctcagcttgatgcc
ttcatcatggacaaggccctgctggactatgaggtgtccattgacgcagactgcaaactg
ctgactgtgggaaaacctttcgccattgaaggttatggaatcggcctgccccagaactcg
ccgctaacttccaacgtgtcagagttcatcagccgctacaagtcggatggcttcatggac
atgctgcacgacaagtggtacaaggtggttccctgtgggaagagggtcttcgccgtcaca
gagacgctgcagatggggatccaccacttctcagggctgtttgtgctgctcagcgtgggg
gtgggcggagctctcctcaccctggtgggagaacacgccttctaccgcctcatcctgcct
cacatccgccggagacagaagttcaagtactggctgcacaccagtcagaaaattcaccga
gctttaaacatgacctacgaagatgtaaaaaggcaaagggcgactgcagaaaaaaggtgc
aatcttcagaaactgctgccccagcagccggctccagcccccccacccgctccagccaag
tggaacaacgagtgccgggagggttccagggaagttaaggacaacaagcgagtccatttc
aacttggagaccctcaacacccgcgggctcctagcacgtgcaggggctggggaaagagga
ggaggaggaggaggaggaggaggaggtgaatcagtggtccaggtgtgtgagaacgggggt
ccggccttacccccaccttcctcatcctcatcctcacccgccagggctagtgagctccag
gagctgcaggagcgcatcgaggagatccgcggacagctgcgggtggccctggcgaggagg
gccgagctgcagacctccctggccaaagaaaaggcctgcccgagacctgaacccgaggtc
accagcacctcaccatctaaagacacaaatgcgaagaggtga
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