KEGG   Lepisosteus oculatus (spotted gar): 102682899
Entry
102682899         CDS       T07349                                 
Symbol
pcdh10
Name
(RefSeq) protocadherin-10 isoform X1
  KO
K16499  protocadherin delta 2
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:loc04515]
    102682899 (pcdh10)
Cell adhesion molecules [BR:loc04515]
 Cadherins
  Protocadherins
   102682899 (pcdh10)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th TMEM154
Other DBs
NCBI-GeneID: 102682899
NCBI-ProteinID: XP_006629687
Ensembl: ENSLOCG00000010614
LinkDB
Position
LG4:complement(42031774..42044233)
AA seq 994 aa
MIVLFVLFCIVDGVVSQIRYSVPEEQDHGTFVGNIAEDLGLDITKLSSRRFQTVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSATCLLHLEVFLENPLELFRVEIEIVDINDNPPGF
PETDITVEISESATPGTRFPLESAFDPDVGTNALRTYEITTNSYFYLDVQTQGDGNKFAE
LVLEKPLDREQQAVHRYVLTAVDGGLPQRTGTALLVVKVLDSNDNVPVFDQSVYTVSLPE
NSPVGTLVIHLNATDMDEGQNGEIVYSFSNHISPRVKDLFNIDPRTGRIEVSGEVDYEES
SMYQIYVQAKDLGPNAVPAHCKVLVKVIDVNDNAPEISFSTVTESVSEKAAPGTVIALLS
VTDKDSGENGQIHCEILGDVPFKLKSSFRNYYTIVTDGPLDRENIDSYTITVVAKDKGSP
SLATSKSIKVQVSDENDNSPRFTQPIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYISYS
ILECDIQGMSVFTYVSINSENGYLYALRSFDYEQLRDFSFMVQAKDSGSPELSSNATVNV
IIVDQNDNAPSVIAPLGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGDNARLSYSILRGN
EMGMFRMDWRTGELRTARRVSSKRDPHHPYDLLIEVRDHGQPPLSSTASVVVMIVDSVVE
GHSGDRGSTKTKENSLDLTLILIIALGSVSFIFLLAMIVLAIRCQKDKKMNIYTCLASDC
CLCCSSCCSRQARARKKKLSKSDIMLVQSANVTNTAQVPVEESGSFGSHHQNQNYCYQVC
LTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDILSNGSILSNETKHQRTE
LSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGHASGADLFSNCTEEC
KALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFETQEQTGERSFSTFGKE
KSHHGTLERKEFDALLSSTRAPYKPPYLSRKRIC
NT seq 2985 nt   +upstreamnt  +downstreamnt
atgattgtcttatttgtactgttctgtattgtggatggagtggtttcccagatacgctat
tctgttccagaggagcaggaccacggcacgtttgtgggaaatattgctgaggatttgggc
ttggacataacaaaactttcatctcgtagatttcagactgtgcccagttctaggactcca
tacctcgaagtgaatctggaaaacggagtgctttttgtgaatgaaaaaatcgatagggaa
cagatctgcaaacagagtgctacctgccttctacacctggaggtatttttagaaaacccg
ttggagcttttccgcgtggaaattgaaatagtggatatcaatgacaatcccccaggcttc
cccgaaactgacattactgttgaaatttcggaaagtgccactcctggaactcgctttccg
ctggaaagcgcattcgaccccgatgttggcaccaatgcgctccgcacttacgaaatcaca
actaacagctatttttaccttgatgtacaaacacaaggagatggaaacaagtttgctgaa
ctagtactggaaaagccactggacagggagcagcaagcagtacacaggtacgtactaaca
gcagtagatggtggtctgcctcagaggactggtacggcgctacttgtcgttaaagtacta
gattccaatgataatgttccagtctttgaccagtcggtgtatacagtcagcctacctgaa
aattcgccagtgggcactttggtcattcatttaaatgccaccgacatggacgagggacaa
aatggagaaattgtgtattcttttagcaatcatatttccccgagagtaaaggatctgttt
aatattgacccaagaactggcaggattgaagtgagtggggaggtcgactatgaggagagc
agtatgtatcaaatctacgtgcaggcgaaagatcttggacctaatgctgttccagctcac
tgtaaagttctggtcaaagtgatagacgtgaatgataatgccccggagatcagtttcagc
accgtgaccgagtcagtaagcgaaaaggctgcccccggcactgtgatcgccttgctcagc
gttaccgacaaggactccggggaaaatggacagatccactgcgaaattctcggagatgta
cctttcaaactcaaatcttcttttaggaactattacaccattgttaccgacggaccactg
gacagggaaaatattgattcatacacaatcacagttgtggcaaaagataagggttccccg
tcccttgccacaagcaagtccattaaagtgcaggtgtcggatgaaaatgacaattctcca
aggtttacgcaacctatttatgatgtttatgtgactgaaaataatgtgccaggggcttac
atttatgcagtaagcgccgttgatcctgacgtcgggcaaaatgcttatatttcttactcc
atattggagtgcgacatacagggtatgtctgtttttacttatgtgtcaatcaactctgaa
aacggctatctatatgctttgagatcttttgattatgaacaattaagagacttcagcttt
atggttcaagctaaagactctggtagccccgaattatcctccaatgctactgttaatgtt
atcatagtggatcaaaatgacaacgcaccttcagtcatcgctccgctaggcaaaaacggc
acagccaaagaacatttgcccagatctgcagaacctggctatttggtgacccggatagtt
gctatggatgcagacgatggtgacaacgcgcgtctgtcttacagtatattaagaggcaat
gaaatgggaatgtttcgtatggactggaggactggtgagctaaggactgccagaagggtc
tcgagtaaaagagatccgcatcacccttatgacttgttgattgaggtgagggaccacgga
caaccacctctttcatctacagctagtgttgtcgtgatgatagtagacagcgttgttgaa
ggccacagtggggatcgtggttccacaaaaacgaaagaaaactccctcgatttgactcta
attcttatcatcgcactgggctccgtgtcattcatcttcctcttggcaatgatagtactg
gccatccgatgtcaaaaggacaaaaaaatgaacatatacacatgcttggcgagtgattgc
tgtctgtgctgcagttcttgctgtagcaggcaggcaagggccagaaagaaaaagcttagc
aagtcagatatcatgctggtgcagagcgctaatgtcaccaacactgcccaagtcccagta
gaggaatccgggagctttggttcccatcatcaaaaccagaattattgctaccaggtatgt
cttacaccggaatctgccaaaactgatctcatgttcctaaagccctgtagtccatctagg
agcacagacacagaccataatccctgtggagccatagtgacaggttatactgaccagcag
cctgacatcttatctaacggcagcattttatcgaacgagacaaagcaccagagaactgaa
ctcagttaccttgttgatagaccgcggcgtgttaacagttctgctttccaggaagcagat
atagtgagttctaaggacagtggtcacggtgatagtgagcaaggagacagcgaccatgac
gccaccaatcgtggccatgcctctggtgctgatcttttttcaaattgcacagaagagtgc
aaagccctagggcactcagatcgatgctggatgccctcctttgtgccatccgatggccgc
caggctgcagattatcgtagcaatctgcatgttccaggaatggactctgtgccagacact
gaggtatttgaaactcaagagcaaactggggagagatctttctccacctttggcaaagag
aagtcacatcacggcacgctagagaggaaagagtttgatgcacttctgtctagcacacgt
gcgccttacaaaccaccttatttgtcgcggaaaaggatttgctag

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