Lepisosteus oculatus (spotted gar): 102682899
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Entry
102682899 CDS
T07349
Symbol
pcdh10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
loc04515
]
102682899 (pcdh10)
Cell adhesion molecules [BR:
loc04515
]
Cadherins
Protocadherins
102682899 (pcdh10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
102682899
NCBI-ProteinID:
XP_006629687
Ensembl:
ENSLOCG00000010614
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All DBs
Position
LG4:complement(42031774..42044233)
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AA seq
994 aa
AA seq
DB search
MIVLFVLFCIVDGVVSQIRYSVPEEQDHGTFVGNIAEDLGLDITKLSSRRFQTVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSATCLLHLEVFLENPLELFRVEIEIVDINDNPPGF
PETDITVEISESATPGTRFPLESAFDPDVGTNALRTYEITTNSYFYLDVQTQGDGNKFAE
LVLEKPLDREQQAVHRYVLTAVDGGLPQRTGTALLVVKVLDSNDNVPVFDQSVYTVSLPE
NSPVGTLVIHLNATDMDEGQNGEIVYSFSNHISPRVKDLFNIDPRTGRIEVSGEVDYEES
SMYQIYVQAKDLGPNAVPAHCKVLVKVIDVNDNAPEISFSTVTESVSEKAAPGTVIALLS
VTDKDSGENGQIHCEILGDVPFKLKSSFRNYYTIVTDGPLDRENIDSYTITVVAKDKGSP
SLATSKSIKVQVSDENDNSPRFTQPIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYISYS
ILECDIQGMSVFTYVSINSENGYLYALRSFDYEQLRDFSFMVQAKDSGSPELSSNATVNV
IIVDQNDNAPSVIAPLGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGDNARLSYSILRGN
EMGMFRMDWRTGELRTARRVSSKRDPHHPYDLLIEVRDHGQPPLSSTASVVVMIVDSVVE
GHSGDRGSTKTKENSLDLTLILIIALGSVSFIFLLAMIVLAIRCQKDKKMNIYTCLASDC
CLCCSSCCSRQARARKKKLSKSDIMLVQSANVTNTAQVPVEESGSFGSHHQNQNYCYQVC
LTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDILSNGSILSNETKHQRTE
LSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGHASGADLFSNCTEEC
KALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFETQEQTGERSFSTFGKE
KSHHGTLERKEFDALLSSTRAPYKPPYLSRKRIC
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcttatttgtactgttctgtattgtggatggagtggtttcccagatacgctat
tctgttccagaggagcaggaccacggcacgtttgtgggaaatattgctgaggatttgggc
ttggacataacaaaactttcatctcgtagatttcagactgtgcccagttctaggactcca
tacctcgaagtgaatctggaaaacggagtgctttttgtgaatgaaaaaatcgatagggaa
cagatctgcaaacagagtgctacctgccttctacacctggaggtatttttagaaaacccg
ttggagcttttccgcgtggaaattgaaatagtggatatcaatgacaatcccccaggcttc
cccgaaactgacattactgttgaaatttcggaaagtgccactcctggaactcgctttccg
ctggaaagcgcattcgaccccgatgttggcaccaatgcgctccgcacttacgaaatcaca
actaacagctatttttaccttgatgtacaaacacaaggagatggaaacaagtttgctgaa
ctagtactggaaaagccactggacagggagcagcaagcagtacacaggtacgtactaaca
gcagtagatggtggtctgcctcagaggactggtacggcgctacttgtcgttaaagtacta
gattccaatgataatgttccagtctttgaccagtcggtgtatacagtcagcctacctgaa
aattcgccagtgggcactttggtcattcatttaaatgccaccgacatggacgagggacaa
aatggagaaattgtgtattcttttagcaatcatatttccccgagagtaaaggatctgttt
aatattgacccaagaactggcaggattgaagtgagtggggaggtcgactatgaggagagc
agtatgtatcaaatctacgtgcaggcgaaagatcttggacctaatgctgttccagctcac
tgtaaagttctggtcaaagtgatagacgtgaatgataatgccccggagatcagtttcagc
accgtgaccgagtcagtaagcgaaaaggctgcccccggcactgtgatcgccttgctcagc
gttaccgacaaggactccggggaaaatggacagatccactgcgaaattctcggagatgta
cctttcaaactcaaatcttcttttaggaactattacaccattgttaccgacggaccactg
gacagggaaaatattgattcatacacaatcacagttgtggcaaaagataagggttccccg
tcccttgccacaagcaagtccattaaagtgcaggtgtcggatgaaaatgacaattctcca
aggtttacgcaacctatttatgatgtttatgtgactgaaaataatgtgccaggggcttac
atttatgcagtaagcgccgttgatcctgacgtcgggcaaaatgcttatatttcttactcc
atattggagtgcgacatacagggtatgtctgtttttacttatgtgtcaatcaactctgaa
aacggctatctatatgctttgagatcttttgattatgaacaattaagagacttcagcttt
atggttcaagctaaagactctggtagccccgaattatcctccaatgctactgttaatgtt
atcatagtggatcaaaatgacaacgcaccttcagtcatcgctccgctaggcaaaaacggc
acagccaaagaacatttgcccagatctgcagaacctggctatttggtgacccggatagtt
gctatggatgcagacgatggtgacaacgcgcgtctgtcttacagtatattaagaggcaat
gaaatgggaatgtttcgtatggactggaggactggtgagctaaggactgccagaagggtc
tcgagtaaaagagatccgcatcacccttatgacttgttgattgaggtgagggaccacgga
caaccacctctttcatctacagctagtgttgtcgtgatgatagtagacagcgttgttgaa
ggccacagtggggatcgtggttccacaaaaacgaaagaaaactccctcgatttgactcta
attcttatcatcgcactgggctccgtgtcattcatcttcctcttggcaatgatagtactg
gccatccgatgtcaaaaggacaaaaaaatgaacatatacacatgcttggcgagtgattgc
tgtctgtgctgcagttcttgctgtagcaggcaggcaagggccagaaagaaaaagcttagc
aagtcagatatcatgctggtgcagagcgctaatgtcaccaacactgcccaagtcccagta
gaggaatccgggagctttggttcccatcatcaaaaccagaattattgctaccaggtatgt
cttacaccggaatctgccaaaactgatctcatgttcctaaagccctgtagtccatctagg
agcacagacacagaccataatccctgtggagccatagtgacaggttatactgaccagcag
cctgacatcttatctaacggcagcattttatcgaacgagacaaagcaccagagaactgaa
ctcagttaccttgttgatagaccgcggcgtgttaacagttctgctttccaggaagcagat
atagtgagttctaaggacagtggtcacggtgatagtgagcaaggagacagcgaccatgac
gccaccaatcgtggccatgcctctggtgctgatcttttttcaaattgcacagaagagtgc
aaagccctagggcactcagatcgatgctggatgccctcctttgtgccatccgatggccgc
caggctgcagattatcgtagcaatctgcatgttccaggaatggactctgtgccagacact
gaggtatttgaaactcaagagcaaactggggagagatctttctccacctttggcaaagag
aagtcacatcacggcacgctagagaggaaagagtttgatgcacttctgtctagcacacgt
gcgccttacaaaccaccttatttgtcgcggaaaaggatttgctag
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