Lepisosteus oculatus (spotted gar): 102683001 Help Entry 102683001         CDS       T07349                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism loc  Lepisosteus oculatus (spotted gar) Pathway loc04382   Cornified envelope formation loc04510   Focal adhesion loc04512   ECM-receptor interaction loc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:loc00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102683001 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102683001 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102683001 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     102683001 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:loc04147]     102683001 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:loc00536]     102683001 (col4a1) Exosome [BR:loc04147]  Exosomal proteins   Exosomal proteins of other cancer cells    102683001 (col4a1) Glycosaminoglycan binding proteins [BR:loc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102683001 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  102683001 NCBI-ProteinID:  XP_015219659 Ensembl:  ENSLOCG00000008957 LinkDB All DBs Position LG17:complement(23961264..24048880) Genome browser AA seq 1491 aa AA seqDB search MVFLNCALLLIAVISCNIYETRAEGCSGCGKCDCSGVKGEKGERGFPGLQGNMGFPGMQG HEGPPGPMGPKGDTGEPGMPGLKGIRGPTGLAGFPGNPGLPGIPGQDGPPGPPGIPGCNG TNGERGFDGIPGLPGLQGPPGISGIPGMKGDPGEIIGFISHKGEKGFPGVPGNQGMKGLP GLTGPIGPPGPVGPTGLPGPPGPPGPPGELSDVLSFQGAKGEKGDRGVPGPPGQSIIDER TGPKVVYEIGPKGDTGPKGVKGEKGYCVPHMSGVKGEPGSPGPRGKPGKEGENGSKGDQG YPGFPGPGGMKGEKGERGPPGFGHGEPGPPGFPGRSGEKGERGFPGPQGDAGPPGLSLQG PPGPPGFPGESGQKGDRGSPGESLPGQRGQDGLPGPPGPPGPLGVECSVSIGPSGPPGPR GFQGEMGQKGDKGDTCTNCIASGPSGPPGPQGPDGQQGYPGQPGRKGEKGSAGLPGLRGY PGDNGAPGLIGNPGAKGEPGDVAFSPDLKGEKGERGFDGVPGLPGKDGLPGRDGIPGPPG PKGQPATAGVKGDKGRDGDPGFPGPPGERGPPGIPGFGLPGETGEKGLQGVPGLPGSPGI PGPKGDPGKAEGIPGPRGVPGFPGIPGLEGQPGPPGPQGVKGRPGLKGEKGYPGVPGLDM PGPQGEQGSPGFPGLPGSVGLPGTPGPAGREGLPGPQGPKGEMGVMGIPGLPGSGGSKGS PGNPGLRGDPGLSGPRGIDGDPGYKGDKGEPGIQGPAGNMTDVEMEHLKGEKGDQGDQGL TGSTGLKGHQGEPGSPGMPGKDGEPGLPGHPGLKGDTGVPGEPGSVGTPGPKGSMGEMGL PGPFGPKGSKGLAGTPGYKGFQGVSGEKGEKGSAGPPGIGLPGSKGEKGEQGVVGLEGIK GEKGLKGSVGVPGMHGKPGEKGDSGGQGYPGSPGPPGEKGVVGLPGIPGDPGLQGRPGEP GLQGPPGAQGERGEAGNDGIPGTPGERGDPGIPGIGTPGAPGTAGSKGDEGIPGEPGIPG TPGIPGIKGDRGLPGFQGLQGQPGERGLPGPAMHGPKGERGQPGDPGHTGSPGAPGPPGI PGNVGAKGEKGYPGFSGPPGLQGEKGDKGESGIPGNTGLPGLNGQKGEKGIQGVPGFQGM KGETGIFGFKGEAGDRGLPGIKGADGPPGPPGPFISIKGDIGFPGPQGPVGPQGLQGYPG PKGQQGVTGPQGVSGEEGIPGYDGRPGQKGEPGPIGPAGPRGYPGPPGPDGLPGLVGPPG QSSKAHGFLITRHSQTVDVPSCPKGTMLIYDGYSLLYVQGNERSHGQDLGTAGSCLRKFS PMPFLFCNINNVCNFASRNDYSYWLTSPEPMPMSMAPITGESIKPFISRCAVCEAPAMVI AVHSQTIQIPPCPGGWESLWIGYSFVMHTSAGSEGSGQALASPGSCLEEFRSAPFIECHG RGTCNYYANSYSFWLATIDNGDMFKKPVPATLKAGELRTHIGRCHVCLKKT NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atggtatttctcaactgtgccttgctgcttatagcggtcatctcatgtaacatttacgag actagagcagagggatgctctgggtgtggcaaatgtgactgcagtggtgtgaaaggggag aagggtgaaaggggatttccaggactgcaaggtaatatggggtttcctggaatgcaaggc catgaaggtccccctggtccaatgggccctaaaggtgatactggtgagccaggaatgcca ggtcttaaaggaattcgcggaccaacgggtctggctggatttccaggaaacccaggcctt ccaggtattccaggacaagatggccctcctggtccacctggaattccagggtgcaatggg acaaacggtgaaagaggctttgatggaatccctggtttaccaggacttcaaggcccaccg ggtatatctggaattcctggaatgaagggtgacccaggagaaatcattggtttcatttcg cataagggtgagaagggatttcctggagttccggggaatcagggcatgaaagggttacca ggcctaacaggtccaattggccctccaggtccagtgggacccacaggtttgcctggtccc cctggcccccctggtccccctggcgagttgagtgacgtactctctttccaaggtgcaaaa ggtgaaaagggagaccgcggagtaccaggtcctccaggccaatcaattatcgatgaacgg actggccccaaggttgtatatgaaataggaccgaagggtgacactggcccaaaaggtgta aaaggggaaaaagggtactgtgttccacatatgagtggtgttaaaggtgaacctggatca cccggccccagaggtaaaccaggaaaagagggagaaaacgggagtaaaggtgatcaagga tatccaggattccctggacctgggggaatgaagggtgagaaaggtgaaagaggaccacct ggatttggacacggagaacctggacctcctgggtttcctgggagatctggtgaaaaagga gaacgaggttttcctggtcctcaaggagatgcaggtccaccaggcttaagtctccaaggg ccccctggtcctccagggtttccaggggaatctggtcagaagggtgatcgaggatctcct ggagaatcacttcctggtcagagaggtcaagatggattgccagggccccctggtccccca gggcctttaggggtagaatgtagtgtttcaataggcccatctggtccccctggaccaaga ggatttcaaggagagatgggccagaaaggagacaaaggagacacctgtaccaactgtata gcctctggaccatctgggcctcctggacctcaaggccctgatggacagcaaggttatcca gggcagccaggtaggaagggggagaaaggttcagcaggattaccaggtcttcgaggatac cccggcgataatggtgctccagggctgattggaaatcctggtgcgaaaggcgaacctggt gatgttgcttttagtcctgacctgaagggtgagaagggtgaacgaggttttgacggtgtc cctggacttcctggtaaagacgggttgccaggaagagacggcattcctggacctcctggt cctaaaggacaacctgcaactgcaggcgtcaaaggagataaaggacgggatggggaccct ggtttccctggccctccaggagaaagagggcctcctggcataccagggttcggcctccct ggtgaaactggggagaagggactacagggtgtccctggactcccgggatctcctggcatt ccaggaccaaagggtgatcctggtaaggcagagggtatacctggacccagaggtgtgcct gggtttccagggattccaggactggaagggcagccaggtcctcctggacctcagggagtg aaaggacgtccgggcttgaagggtgagaaaggctaccctggtgttccaggactggacatg cctgggccccagggagaacaaggctctccaggtttccctgggctgccaggatctgtggga ttacctgggacacctggacctgcagggagagaaggacttcctggaccacaaggccccaag ggagaaatgggagtgatgggaatccctggattacctggatctggaggttctaagggtagt ccaggtaacccaggactgagaggtgatccagggctaagtgggcccaggggaattgatggt gacccaggctacaaaggagataaaggggagccaggtatacagggacccgcaggaaacatg actgatgtggaaatggaacatctaaagggtgaaaagggagaccagggagaccaaggtctc actggaagcacagggctgaaggggcaccagggggaaccaggctctccaggaatgcctggg aaagatggggagccaggcctacctggccatccaggtctcaagggtgacacaggtgtccca ggtgaaccagggtctgttggtacaccaggacctaagggcagcatgggagaaatgggccta ccgggtccatttggaccaaagggtagtaaagggctagctggaacacctgggtacaagggt tttcaaggagtatctggggagaagggggagaaggggagtgcgggaccaccaggcatcgga ttgccaggctcgaagggagaaaagggtgagcaaggtgtggttggcttggagggaatcaaa ggggaaaaaggactgaagggctcagtaggagttcctggaatgcacggaaaacctggggag aaaggagactctggaggtcaggggtatccaggtagtcccggtcccccaggagagaagggc gtagtggggttacctgggattcccggagaccctggactacagggaaggccaggtgaacca ggacttcaaggacctcctggtgcccaaggagagaggggtgaggctggtaatgatggtata ccaggaacacctggagagaggggtgacccaggcattccaggaataggcaccccaggggca ccaggtactgctggaagtaaaggggatgaaggaatccctggagaacctggtattcctggc actcctggcattcctggcatcaaaggggacagggggctgcctggtttccagggactgcag ggtcagccaggagaacggggtcttcccggtccagccatgcatgggccgaagggagagaga ggacaaccgggcgatcctggacacacaggttcacccggagccccaggacctcctggaatc ccaggaaatgttggggccaaaggagagaaaggatatccaggctttagtggaccacctgga ctacagggggaaaagggagacaaaggagaatctggaattcctggaaacactggtcttcct ggattaaatgggcaaaagggagaaaagggcatccaaggagttcctggatttcaaggaatg aagggtgaaacgggaatatttggattcaaaggagaagcaggcgacagaggtctcccaggc atcaagggtgctgatggtcccccaggacctccaggtcccttcatctctattaaaggagac attggttttcctggcccccaggggccagtagggccccagggactgcagggctacccagga cctaaaggacagcaaggtgtgactggcccacaaggagtgtcaggggaggagggcatacct gggtatgatggcaggcctggacagaaaggagagcctggacctattggccctgcaggccca aggggatatcccggacctccaggcccagatggcctgcctggactagtgggccctccaggg cagtcgtccaaagctcatggctttctcatcacaagacacagtcagacagtggacgtgcca tcgtgtccaaaggggacaatgctaatctacgatggctattctttgttatatgtgcaaggc aatgaaaggtcacatgggcaagacttaggtactgccgggagctgtctcagaaagttcagt cccatgccgtttttgttctgtaacatcaataacgtttgcaactttgcctcaagaaatgat tattcctactggctcacctcacctgaaccaatgccaatgagcatggctcctattactggt gaaagtattaagcccttcatcagcaggtgtgctgtttgtgaggctccagccatggtcatt gcagtccacagccagacaattcagatcccaccctgccccggtggatgggaatccctgtgg attggctactcctttgtgatgcacaccagtgcgggttcggagggctctggccaggctttg gcatcccctggctcctgcctggaggagttccgcagtgcccccttcattgagtgccatggc agagggacctgcaactactatgccaactcttacagcttttggctggcaacgatagacaat ggggatatgtttaagaagcctgtacctgccacactgaaagcaggagaattacgaacccac atcggccgatgtcacgtctgcttgaagaagacataa

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