Lepisosteus oculatus (spotted gar): 102683046
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Entry
102683046 CDS
T07349
Symbol
hcfc2
Name
(RefSeq) host cell factor 2
KO
K27390
host cell factor 2
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102683046 (hcfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102683046 (hcfc2)
03029 Mitochondrial biogenesis [BR:
loc03029
]
102683046 (hcfc2)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
102683046 (hcfc2)
Mitochondrial biogenesis [BR:
loc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102683046 (hcfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Beta-prop_TYW4
Motif
Other DBs
NCBI-GeneID:
102683046
NCBI-ProteinID:
XP_015207351
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All DBs
Position
LG8:246870..260991
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AA seq
676 aa
AA seq
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MSPRPPAERESGGTMASQGPLWRKVQSFSGPVPRSRHGHRAVAIRELLIVFGGGNEGIAE
ELHVYNTGTGWAARARRNRRSRGARAGRRAGLEGLAGQSGSCTADLARVRACTTHCVRGA
LATCVFVYTGSPASRCGPGALWGFQVVLPESFRAIVVCFSAEERSCSLAAVILRSPETMT
WSQPDTRGPAPAPRSLHSANVIGNRMFVFGGWIPVLRSEDKPSSLGAEWTCTNSMSALNL
DSMTWSCLLSNEDGQEEGKGAGSGPRPRAGHCAATIGSRLYIWSGRDGYRKAWNSQVCCK
DLWYLETEKPSTPSAVLLVKATINTLHVAWRPLPAAEAYLLQLQPLCAGPAPSPGPKQQQ
PSSEAPPSGPPAAPDSGSGRAPGERPLGDASPRARLEAAPPEGAHLAHRTDDNRPAGTRL
PAAIFLPERESSPAPASPLPTANGAADMEPAEERADPPQWYDVGIFKTLFSEVTHYYLPP
PGGAQGPVKPADVQDYGDRKQQPLTPGATYRFRVAGINSCGQGGYSPVSEYKTCQPGFPG
APSSVKITKAADSVHITWEPPSSPSGRILEYSMYLAVRKSRASSPGPLAFIRIYRGTKTF
CTVSSSHLGNAHIDCTSRPAVVFRIAAKNEQGYGPATQIRWLQDTYKQKVPQPETCEKHG
LMMPDSACSEKTKTET
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtccccccgtcccccggcggagagggagagcggcgggacgatggcttcgcaaggtcca
ctctggaggaaggtccagtccttcagcggtcccgtcccacggtcccggcacggccaccgg
gccgtggccatccgggagctgctcatcgtgttcgggggcgggaacgagggcatcgccgag
gagctgcacgtctacaacaccggtacgggctgggcagctcgcgcccgccggaaccgccgc
agccggggggcacgggccggccgccgcgcggggctggaggggctcgcggggcagagcggg
tcgtgcacggcggacctggcgcgtgtgcgcgcgtgcaccacccattgtgtgcgcggggcg
ctggcaacatgtgtctttgtttacacgggctcgcctgcgtcccgctgtggtccaggggcg
ctttggggttttcaggtggtcctgcctgaaagtttccgtgcgatagttgtttgtttttct
gcggaagagcgctcatgttctctggctgctgtgatcttgcgttccccagaaaccatgacc
tggtctcagccggacacccgcgggcctgccccggcccccaggagcctccactccgccaac
gtcataggaaacagaatgtttgtgttcgggggctggatcccggttctgaggagcgaagac
aagccgagctcgctgggcgccgagtggacgtgcaccaactccatgtccgccctgaacctc
gactccatgacctggagctgcctgttgtccaacgaagacggccaggaggaggggaaagga
gctggcagcggccccaggcccagggcagggcactgcgccgccaccatcggctcgcgcctc
tacatctggagcggccgggacggctaccggaaggcctggaactcccaggtgtgctgcaag
gacctgtggtacctggagacggagaagccctccaccccgtcggcggtgctgctggtgaag
gccaccatcaacacgctgcacgtggcctggcggcccctccctgcggcagaggcctacctg
ctccagctgcagcctctttgcgcgggaccggccccctcccccggcccaaagcagcagcag
ccttcgtccgaggcgcccccttcaggaccgccggccgccccggactcaggcagcggccgg
gcccccggcgagaggcccctgggagacgcgagtcctcgcgcgcgcctggaggccgcccct
ccggagggagcccacctggcgcaccggacggacgacaacaggcccgctggcacccggctg
cccgccgccatctttcttccagagcgagagtcttccccagccccagcgtcccccttgcct
actgccaacggcgccgcagacatggagcccgcagaagaaagggcagaccctccccagtgg
tacgatgtgggaattttcaaaacgctcttctcagaggtgacgcactactacctgccgcca
ccagggggcgcccaggggccagttaaaccagctgatgtgcaggactatggggaccggaag
cagcagccgctgacccccggcgccacctacaggttcagagtggcagggatcaacagctgt
ggccagggggggtacagtcctgtcagcgaatacaagacctgccagccgggcttccctggg
gccccctcctccgtcaagatcacaaaggctgcagattccgttcacatcacctgggagccg
cccagctctccgtccggccggatcctggagtactccatgtacctggcggtgcggaagtcc
cgcgccagcagccccggcccgctggccttcatcaggatctaccgcggcaccaagaccttc
tgcaccgtgtcctcctcgcacctgggcaacgcgcacatcgactgcacctcccggcccgcc
gtggtcttccgcatcgccgccaagaacgagcagggctacggcccggccacgcagatccgc
tggctgcaagatacatataaacagaaagtgccacaacctgagacctgtgagaaacatgga
ctgatgatgccagacagcgcttgttctgagaagaccaagacagagacctga
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