KEGG   Lepisosteus oculatus (spotted gar): 102683098
Entry
102683098         CDS       T07349                                 
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X2
  KO
K14961  COMPASS component SWD1
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:loc03036]
    102683098 (rbbp5)
Chromosome and associated proteins [BR:loc03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     102683098 (rbbp5)
    COMPASS/SET1 complex (yeast)
     102683098 (rbbp5)
    MLL-HCF complex
     102683098 (rbbp5)
    MLL3/MLL4 complex
     102683098 (rbbp5)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40 WD40_CDC20-Fz Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_WDR11_1st Beta-prop_SCAP WDR54 Beta-prop_LRRK2 Beta-prop_TEP1_C Beta-prop_Vps41 WD_LRWD1 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 BUD22 Frtz DUF4124
Other DBs
NCBI-GeneID: 102683098
NCBI-ProteinID: XP_006628496
Ensembl: ENSLOCG00000011387
LinkDB
Position
LG3:complement(32875365..32888377)
AA seq 513 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSLWDVLTGDCDQRFRFPSPILKVQFHPRDQ
NRVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLKT
DTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAGQTNASDEPSAGTGGVDKKQRQPSTEGAPPKKKARTTTIELQGVPSDEVHPLLGVKG
DGKSKKKTAGRPKGSKGNLVQPQYKQHEVQGLD
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgaatctagaactgcttgagtcctttgggcagaattatcctgaggaggcagatggcact
ctggactgtatcagtatggcgctcacctgcactttcaaccgctggggcaccctgctggcc
gtaggctgcaacgatggccgaatcgtcatctgggatttcctcaccaggggcatcgccaaa
attatcagcgcacatatccatccagtctgctcactgtgctggagccgagacggacacaag
ctagtcagcgcctccacagacaacattgtatccctgtgggacgtcctgactggggattgc
gatcagaggttccgcttcccctcccccatcctcaaagtgcagtttcatccccgcgaccag
aacagagttttggtgtgcccaatgaagtcggcgccagtacttcttacgctgtctgactcc
aagcatgtggtgcttccggtggacgatgactcagacctcaatgtggtggcagcattcgac
cgtcgtggggagtacatctacacgggcaatgccaagggaaagattctggtattgaagaca
gacacccaggatctagtggcttcttttcgagtgacaacaggaaccagcaacaccacagca
atcaaatctatcgagttcgctcgcaagggcagctgtttcctcattaacacagcggaccgg
ataatccgggtgtacgatgggagggagatcctgacgtgtggccgtgacggagagccggag
cccatgcagaagctccaggacttggtcaacaggacgccctggaagaagtgctgcttctcg
ggagacggggagtacattgtggctggctcggcccggcagcacgccctctacatctgggag
aagagcatcggcaatctggtcaagatccttcatggcacccgcggagagctgttgctggat
gtagcgtggcacccggtgcggcccataattgcttctatctccagcggagtggtgtctatc
tgggcccagaaccaggtggaaaactggagtgccttcgcacctgacttcaaagagctggat
gaaaatgtggagtatgaggagagagagtccgagtttgatattgaggatgaagacaaaagt
gaacctgaacagacaggtgctgatgcagcagaggacgaggaggtagatgtgacctctgtg
gacccaatcgtcgctttttgcagcagtgacgaggagctggaggactataaggccctgctg
tacctccccatcgccccggaggtggaggacccagaggagaaccctttcggcccgccccca
gatgcagccggccagaccaatgcctctgacgagccctctgctggcacaggcggggttgac
aagaagcagcggcaaccttccactgaaggggctcccccgaagaagaaggcccggaccacc
accatcgagctacagggtgtccccagcgatgaagtgcacccgttgctgggcgtaaagggg
gacggcaagtccaagaagaagacagccggtcggccaaagggatcaaaagggaatttggtg
cagccccagtacaagcagcacgaagtgcagggattggactga

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