Lepisosteus oculatus (spotted gar): 102683266
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Entry
102683266 CDS
T07349
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04141
Protein processing in endoplasmic reticulum
loc04210
Apoptosis
loc04217
Necroptosis
loc04218
Cellular senescence
loc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102683266
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102683266
04217 Necroptosis
102683266
04218 Cellular senescence
102683266
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102683266
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
loc01002
]
102683266
Enzymes [BR:
loc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
102683266
Peptidases and inhibitors [BR:
loc01002
]
Cysteine peptidases
Family C2: calpain family
102683266
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
Gpi1
Motif
Other DBs
NCBI-GeneID:
102683266
NCBI-ProteinID:
XP_015218049
Ensembl:
ENSLOCG00000015637
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Position
LG16:complement(3529356..3559252)
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AA seq
704 aa
AA seq
DB search
MFLFGGISARIQKDRLKAEGMGSNDRALKFQNQDYDALKQECIESGCLFEDPLFPAEPPS
LGFKELAPHSSKTRGVEWMRPTELTANPQFIVGGATRTDICQGALGDCWLLAAIASLTLN
EKLLHRVVPHGQSFQEDYAGIFHFQFWQFGEWVDIVVDDRLPVKDGELLFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIISKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLREVDYRGRSERLIRIRNPWGQVEWTGAW
SDNSSEWNEIDPSERDDMHLKMEDGEFWMAFQEFLRQFSRLEICNLTPDALSEDALSFWN
TIKFEGSWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEMACSFLVALIQKDRR
LYRKQGQDMHTIGFAIYEVPEEYKGCQNVHLKKDFFLRHQSCARSETFINLREVSSRLRL
PPGEYLIVPSTFEPSKEADFVLRVFTEKQSETQELDEEVSAELEEVEEISEDDIDESFKS
MFAQLAGEDMEISVRELQTILNRVVCRHKDLKTDGFSMESCRSMVNLMDKDGSARLGLVE
FQILWNKIRKWLGIFRQYDLDKSGTMSSYEMRLALEPAGFKLNNKLNQVLVARYADNETI
DFDNFICCLVKLEAMFRAFQDLDREGTGVAELNLTEWLFMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtttggagggatctctgctcgcatacagaaggacaggctgaaggctgaaggg
atgggatccaacgacagggctctaaaattccagaaccaggactacgacgccctgaagcag
gaatgcatcgagagtggctgcctgtttgaggaccccctattccctgctgaacccccttca
ctggggttcaaggagctggcaccccactcctccaaaactcggggtgttgagtggatgcgc
cccacggagctgacagcgaatcctcagttcattgttggaggtgctacaaggaccgatatc
tgccagggagccttgggtgactgctggctcctggctgccattgcctctctcaccctcaat
gagaagctgctgcacagagtggtcccacacggccagagcttccaagaggactatgcaggg
attttccatttccagttctggcagttcggggagtgggtggacatcgtggttgatgacagg
ctcccggtgaaagatggggagctgctctttgtccactctgcggaaggcaatgagttctgg
agcgccctggtggaaaaagcctatgccaagctgaacggctcttatgaggctctgtcagga
ggcagcaccactgagggctttgaggactttaccgggggcgtgtcggagatgtacgagctg
cgcaaggcccccagagacctctataggatcatcagtaaagccctggagaggggctccctg
ctgggctgctccattgacatcaccagtgcctttgacatggaggcagtgacattcaaaaag
ctggtgaagggtcacgcttactctgtgacggggctgagagaggtagactaccgaggtcgc
agtgagaggctgatccggatccggaacccatggggtcaggtggagtggactggagcctgg
agcgacaattcttcagagtggaatgaaatcgacccctctgagagagatgatatgcattta
aaaatggaagatggtgagttttggatggcattccaggagttcctgcgccagttctcccgc
ctggagatctgcaacctcacgcccgacgccctgagcgaggacgctctcagcttctggaac
accatcaagtttgaaggcagctggaggcggggcagcactgcggggggctgcaggaaccac
cccaacaccttctggatcaacccccaatacaagatcactctgctggaggaggacgatgac
cccgaggatgacgaaatggcctgcagttttctggtggctctgattcagaaggacaggcgg
ctgtacaggaaacaaggccaggacatgcacaccatcggcttcgccatctacgaggttcca
gaagagtacaagggctgccagaacgtgcaccttaagaaggacttcttcctgaggcaccag
tcctgcgctcgctccgagaccttcatcaacctgcgcgaggtcagctcccgcctgcgcctg
cccccgggggagtacctcatcgtgccctccactttcgagcccagcaaggaggctgacttt
gtgctcagagtcttcacggagaagcagtctgagacacaagagcttgatgaagaagtatca
gcagaacttgaagaggtggaggagatatcggaagatgatattgacgaatctttcaagtct
atgtttgcacagctggctggtgaggacatggagatctctgtccgtgaactccagaccatc
ctcaacagagtggtgtgcaggcacaaggacttaaagacagatggcttcagcatggagtcc
tgcagaagcatggtgaacctcatggataaggacggaagtgcacgcctgggcctggtggag
tttcagattctgtggaacaagatcaggaagtggctgggcatcttcagacaatatgacctt
gacaaatctggaaccatgagctcctatgagatgcgtctggctcttgaaccagcaggcttc
aaactcaacaacaagctgaaccaggttctcgtggctcgatatgctgacaatgagaccatt
gactttgacaattttatctgctgcctggtcaagctggaagccatgttcagagccttccag
gacctggacagagaggggacaggcgtggctgagctgaatctcacagagtggctgttcatg
accatgtgtggttga
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