Lepisosteus oculatus (spotted gar): 102683335
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Entry
102683335 CDS
T07349
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
loc01002
]
102683335 (rhbdl1)
Enzymes [BR:
loc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
102683335 (rhbdl1)
Peptidases and inhibitors [BR:
loc01002
]
Serine peptidases
Family S54: Rhomboid family
102683335 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
102683335
NCBI-ProteinID:
XP_006637122
Ensembl:
ENSLOCG00000003471
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All DBs
Position
LG13:5624199..5710539
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AA seq
379 aa
AA seq
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MNRVCVFISGHESVTPTISSLDPENTGFIGVENFTTLVEHHELQLDPAKLEMLFALVQSN
EEGQVCYQELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILP
CETDRRWYFHQSRLCPPPVFMAIVTVVQIIVFLCYGIMLNKWVLQTYQPDFMKSPLVYHP
GHRAQVWRFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTV
SITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKMLRMILALVCMSSEVGRAVWL
RFSPPLPSSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQRQCSWWVVIFAFATFLLFA
IFWNIFAYELLGVQIPPPP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagtctgtgttttcatctcagggcacgagtcagtcactcctaccatcagcagt
ctggacccagagaacaccggtttcatcggagtggagaacttcaccaccctggtggagcac
catgagctgcagctggaccctgccaagctggagatgctgttcgccctggtacagagcaac
gaggagggccaggtctgctaccaggagctcatcgagctgatgagcagcaagcgttccagc
agtttccgccgcgccatcgccaacgggcgccgcacgctgcagagggagatcctgctggac
gagacaggcctgggcgtgtacaagcgcttcgtgcgctacgtggcctatgagatcctgccc
tgcgagaccgaccggcgctggtacttccaccagagccgcctgtgccccccgcccgtcttc
atggccatcgtcaccgtcgtgcagatcattgtgtttctgtgttacggcatcatgctaaac
aagtgggttctacagacctaccagccagacttcatgaagagtcccctggtgtaccatcct
ggccacagggcgcaagtgtggcgtttcttcagctacatgttcatgcatgttgggctggag
cagctcggattcaacgctctcctccagctgatgattggcgtgcccctcgaaatggtccat
ggcatccttcggatcagcctcctgtacatggcaggggtggtggcgggctccctgacagtg
tccatcacagatatgagagcaccggtggtgggggggtccgggggagtctatgctctctgc
tcggctcacctagccaacgtcgtcatgaactgggcaggcatgcggtgtccatataagatg
ctcaggatgatcttggccctcgtgtgcatgagctcggaggtcggccgggccgtgtggctg
cggttctccccgccgctgccctcctccggcccccagcccagcttcatggcgcacctgtct
ggggccgtggtgggcatcagcatggggctcctgatcctgcgcagctacgaggagagcctg
cagcgccagtgctcctggtgggtcgtcatcttcgccttcgccaccttcctcctcttcgcc
atcttctggaacatcttcgcctacgagctgctgggggtgcagatcccgccgcctccgtag
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