Lepisosteus oculatus (spotted gar): 102683339
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Entry
102683339 CDS
T07349
Symbol
jag1
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04330
Notch signaling pathway
loc04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102683339 (jag1)
04371 Apelin signaling pathway
102683339 (jag1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
loc04090
]
102683339 (jag1)
CD molecules [BR:
loc04090
]
Proteins
102683339 (jag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_2
DSL
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_PEAR1L
EGF_3
cEGF
MAP17
Neur_chan_memb
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
102683339
NCBI-ProteinID:
XP_015218662
Ensembl:
ENSLOCG00000015958
LinkDB
All DBs
Position
LG16:complement(6342768..6373271)
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AA seq
1218 aa
AA seq
DB search
MILKRSSFLAALSLHVVLFCLRAKVSLASGSFELQILSMQNVNGELQNGMCCDGTRNAAD
RKCMRDECDTYFKVCLKEYQSRVSAEGACSFGSGSTSVIGGNTFSLKNIKRNEKSRIVLP
FTFAWPRSYTLIVEALDFNNDTTNNNPGGELIEKAVHSGMINPNRQWQTLKHNGAAAQFE
YQIRVTCDEHYYGFGCNKFCRPRDEFFGHYTCDHNGNKTCLEGWSGPDCSKAICRQGCSS
EHGSCKLPGQCRCLYGWQGDICDKCIPHPGCVHGTCIEPWQCLCETNWGGQLCDKDLNYC
GTHQPCLNGGTCSNTGPDKYQCSCPEGYSGVNCERAERACLSDPCFNGGSCVETSSGFEC
QCAPGWSGPSCMTNVDDCATNPCNHGGTCQDLVNGFKCSCPPQWTGKTCLIDANECDGQP
CVNANSCRNLIGGYFCECIPGWTGQNCDINVNDCKGQCQNGGTCKDLVNGYRCVCPAGYA
GEHCERDINECASSPCLNGGRCQDEVNGFQCLCLAGYSGNLCQLDIDYCEPNPCQNGAQC
YNLATDYFCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAVASNSTPEGVRYISSNVCG
PHGRCKSQAGGKFTCECKEGFTGTYCHENINDCESNPCRNGGTCIDKVSIYQCICSDGWE
GVHCETNINDCRTNPCHNGGTCRDLVNDFYCECKNGWKGKTCHSRESQCDEATCNNGGTC
YDEGDTFKCMCSLGWEGATCNIAKNSSCLPNPCENGGTCVVSGDSFTCVCKEGWEGSTCT
QNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEIN
GYQCLCPPDRSGPRCQEVIRRPCIASGRVMYDGTKWVEDCNTCRCQNGRVSCTKMWCGPK
PCRVHAKGRTECSAGQTCVPVKADHCFVPPCAEQGQCWPSGQEPAKPKCHSSSQFLDNSC
INIIFTFNKEKMEPGLTTERICVELRKLYVMKNLSSEFSVYMTCEPSLSANNEIHVSVST
DDLRKDKSPIKEITNRITDLDSKREGNNTIINAIGEVRIQDKDNKQDYLVPLLSSIFIVL
WILALVTAFLWCVRRRRKQSSHTHTAQEDNTTNNVREQLNQIKNPIEKHAAGTIPIKDYE
SKNSIIAKIRTHNSEMEEDDTDKHLQKARFAKQPAYTLVDREDRSPHTTPTKNPNWTNKQ
DNRDLETAQSLNRMEYIV
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgattttaaaacggagttcattccttgctgctctttctttgcacgtcgttttattttgc
ttgcgagccaaggtgtcgctagcatcagggtcgttcgagctgcagatcttatcgatgcag
aatgtgaatggcgagttacaaaacgggatgtgttgcgatggcactaggaatgcagcagac
cgaaaatgcatgagagatgaatgtgatacttatttcaaagtctgcttgaaggaataccag
tccagggtttctgctgagggggcatgcagcttcggatctggatctacgtctgtcatcggg
ggaaatacattttctttgaagaacatcaagcggaatgagaaatccaggatagtattgcct
ttcacttttgcttggccgagatcctacacactgatagtggaagccttggacttcaataat
gacactactaataacaaccctgggggagagctgatcgaaaaggctgtgcactctggcatg
atcaaccccaaccgtcagtggcaaacgctgaaacacaacggggccgcggcccagttcgag
taccagatccgcgtcacctgcgacgagcactactacggcttcggctgcaataagttttgc
cggccgagggatgaattctttgggcactacacttgcgatcacaacggcaacaagacctgc
ctggaaggatggtcaggacccgattgcagcaaagcgatctgccgtcagggctgcagcagt
gagcatggctcctgtaagttacccggacagtgcagatgtctgtacggctggcagggagat
atatgcgataagtgcattccgcacccaggatgcgttcatggcacttgcatcgaaccttgg
cagtgcctttgtgaaaccaactggggtggtcagctctgtgacaaagatctgaactactgt
gggacgcaccagccttgtttgaacggaggaacgtgcagcaatactgggccagacaaatac
cagtgttcctgtcctgaggggtactcgggagtcaactgtgaaagggcggagcgtgcttgc
ctgtccgatccctgcttcaacggaggaagttgtgttgagacgagctccgggttcgagtgc
cagtgtgctcctggatggagtggaccatcctgcatgactaatgtcgatgactgtgccact
aatccgtgcaatcatggtggtacctgccaagacctggttaatggatttaagtgcagttgc
ccaccacagtggacaggaaaaacatgcttgattgatgccaatgaatgtgacggccagcct
tgtgtaaatgccaacagctgtcgcaacctgattggtggatacttctgcgagtgtatccca
gggtggactggacaaaactgtgacatcaacgtgaacgactgcaaggggcagtgtcagaac
ggaggcacctgcaaggatttggttaatggttatcgttgtgtctgtccagccggctatgca
ggcgagcactgtgagagggacatcaatgaatgcgcaagcagtccctgcctgaatggcggc
cgctgccaggatgaagtgaatggattccagtgcctgtgtcttgccggttactcaggcaac
ctctgtcagctggatattgattactgtgaaccaaacccgtgtcagaatggagcgcagtgc
tacaacctcgccactgactacttctgtaaatgccctgaagactatgagggaaagaactgt
tcgcatttaaaagaccactgtcgtacgacaccctgtgaagtgattgatagctgcacggtt
gcggtcgcctcaaacagcacccctgaaggtgtgcgctacatctcctccaatgtttgtggg
ccccatgggagatgcaagagtcaagctggaggcaaatttacctgcgagtgcaaggaaggc
ttcacaggaacctactgccatgagaatatcaacgactgtgagagcaacccctgcagaaat
ggagggacatgcatcgataaagtgagcatctatcagtgcatctgcagcgatggctgggaa
ggcgtccactgtgagaccaacattaacgactgcaggacaaacccttgccacaatggaggg
acctgtcgggacttggtgaacgatttctactgcgagtgcaagaatgggtggaaaggaaaa
acctgccactcccgtgagagccagtgcgacgaggcgacgtgcaacaacggaggaacgtgt
tacgacgaaggagacaccttcaaatgcatgtgctcactgggatgggaaggagctacctgc
aatatagccaaaaacagtagctgcctgcccaacccctgcgagaatgggggcacctgtgtg
gtgagcggggattcgttcacctgtgtctgcaaagaaggctgggaagggagtacatgcaca
cagaacaccaatgactgcagtccacacccctgttacaacagcggaacatgtgtggacggt
gacaattggtaccgatgtgaatgtgccccgggttttgcaggtccagactgtaggatcaat
atcaatgaatgccaatcttccccatgtgcttttggagccacatgtgtggatgagatcaat
ggttatcagtgcctctgtccgcctgatcgctctggacccagatgtcaagaagtaatcaga
aggccctgtattgccagtggtcgggttatgtatgatgggaccaagtgggttgaagactgc
aacacttgccggtgtcaaaatggaagagtctcctgcacaaagatgtggtgtggccccaag
ccctgcagagttcatgctaaaggccgcactgagtgctccgctggtcagacctgtgtcccc
gtaaaagctgatcactgctttgtgccaccttgtgctgaacaggggcaatgctggccttct
ggacaagaaccagctaaacccaaatgtcattccagctcacagttcctggataacagctgc
atcaacataattttcacctttaacaaggagaaaatggaaccaggactgactacagaacgc
atctgtgttgagctgaggaaattgtacgttatgaagaatctttcatctgagttctccgtc
tacatgacctgcgaaccttcactttctgccaataatgagatacatgtcagcgtatccaca
gatgacctacgaaaagacaagagtccaattaaagagataactaatagaataactgacctg
gacagcaagcgtgagggaaacaacaccataataaatgcgataggagaggtgcgcatacaa
gataaggacaacaaacaagattacctggtgcccttgctgagctccatcttcatcgtcctg
tggatcctggctctggtcacggccttcctgtggtgcgtgcgacgccggaggaagcagagc
agccacactcacactgcccaggaggacaacaccaccaacaacgtgcgcgagcagctcaac
cagatcaaaaaccccatagagaagcacgccgccggcaccatccccatcaaagattacgaa
agcaagaattcgataattgccaaaattaggacgcacaactcggagatggaggaagacgat
actgacaaacacctgcagaaggccaggtttgccaagcagccagcgtacacactggtcgac
agagaagacagatctcctcacaccactcccacaaaaaaccctaactggacaaacaaacag
gacaacagagacttagaaactgctcagagcttaaaccgaatggagtacattgtatag
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