Lepisosteus oculatus (spotted gar): 102683345
Help
Entry
102683345 CDS
T07349
Symbol
parp4
Name
(RefSeq) poly [ADP-ribose] polymerase 4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03410
Base excision repair
loc04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102683345 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102683345 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loc03032
]
102683345 (parp4)
03036 Chromosome and associated proteins [BR:
loc03036
]
102683345 (parp4)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102683345 (parp4)
Enzymes [BR:
loc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
102683345 (parp4)
DNA replication proteins [BR:
loc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102683345 (parp4)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102683345 (parp4)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102683345 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
BRCT
PTCB-BRCT
VWA_CoxE
BRCT_3
PARP_reg
Motif
Other DBs
NCBI-GeneID:
102683345
NCBI-ProteinID:
XP_015219582
LinkDB
All DBs
Position
LG17:30162445..30188076
Genome browser
AA seq
1315 aa
AA seq
DB search
MPAFDNCLVALEVKDLHIGEKKKLKAAITDNGGSIAFVINKKCTHVVVSNLDSVSSNRLK
SIRRFQVPVVGVEYVSQCLEQGRLLVVEGYSPALPHPRDPPRTPKLTGQQPREQPKDLPE
QNEEEKAEEGPTLGHFRVYGENEKGLPTYPEDFQVAKYSVFDKGDGVAVVELQCCAGNPE
LPFRVARREGERCSSQVLKTRGDLIFTATSEAALQAYELVTRELTARGFRELQDPIGEAR
FLGSEKLQELLLEESLNSSTIPREVGEFVELLWTEALGCLGDVLATPVSAISPGDVSRAE
GALLQVHKALSAGAGHSELAALMAEFYRALPHKDPARPTPTAKILSQKRDLCQLIRDIVS
VSEATLWSSTPSSLAKYRALRCSMEQVHPGSAEFSAVEKLLHDSSRPVQIKKALRVCRAA
ELQSFRRQLGNVRPLLHASAPGSFVGILSRGLLLPKTGVEQHGIERTDAGTLGSGIYFSD
AVSTSMKYSKPSAADGTRVLAVCDVALGQCKELVKRDFRLVSAPEGYHSVHGVRRTPRGP
SDFEDDEYVVYDTNQVQLKYVVQFSACDDQVKEFEPSVDVSAQQLEQLEQPLTFDTVSER
EADGPGEYRDPLREVTVGLQDSAGRPLLLQRVHVKGKVMDLLAQVVVFQTYTNHSAVPIE
AKYVFPLDESAAVCGFEAFINGKHVVGEVKEKEQARREYREAIEKGHGAYLMDQEAPDVF
TISVGNLPPESTVLIKITYVAELTVSHGDITFRLPGSVAPWQQSHALTQRTQDTVGKVAV
NEVESERCFALDMSVEMPYEITDIRSVTHQIEIKKTQCKAVISTEGGSSLGADGFLLSIT
LAEMHLPRMWVENHPEKDSQACMLVFYPEFESSGEVGAGEVVIVLDSSNSMRGSALQDAR
KIALLVLKALSCKVNVLFFGTDYKELFLCSQDCKSSFEAAKKFIMTNPPAGGGTELWRPL
RTFSLLAPSRGVRNLLLISDGHVQNEGLTLQLARENVPHTRVFTCGVRSAANRHMLRSLA
RAGGGAHEFFDAKTKHTWQEKVTAQVKRMASPGCSSVSVKWQQFRSGAPPPVQAPAQLLS
LFSDCRLLVYGFVPHCTRATLTGKVSDREIETTVATTELQKTKGTLLHTLAARAVIRDYE
EGSLHAEESEHEARKAELKSYIIGLSKEYSVVTQFTSFVAIEERDEEKQEFGSTDIEELI
AMEDVDCLPYLEWESRNQGSNQENEEEDEEEMDREDHVLQSHSLSESHYECAEYTFLHMP
LFEQSEAQLNVPYIKPTFSCVTSMAQSPSPPVAAPQCSTAGFLFSASSFHPPAAP
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgccggcctttgacaactgccttgtggccctggaggtgaaggacctgcacatcggagag
aagaagaagttaaaggctgcaataacagacaatggggggagcattgcttttgtcatcaac
aagaagtgcacccatgtcgttgtcagtaacctggacagcgtgagctccaaccgcctgaag
agcatccgcaggttccaggtgccggtggtgggggtggagtacgtgtctcagtgcctggaa
caggggagactgctggtggtggaagggtactctccagctctgccacatccccgtgacccc
cctcgcaccccaaaactgacaggtcagcagcccagagagcagccaaaagaccttccggag
cagaatgaggaagagaaggctgaggaaggcccaacactaggccatttcagggtttatggt
gagaatgagaaaggcttgccgacatacccagaagatttccaggtggccaagtattctgtt
tttgacaagggggacggtgtggccgtggtggagctgcagtgctgtgcggggaacccagag
ctgccgttccgcgtcgctcggcgggagggggagcgctgcagcagccaggtcctgaagacc
agaggagacctgatattcactgccacgtcagaagctgccctgcaggcctacgagctggtg
acgagggagctgacagctcggggcttcagggagctccaggatcccattggggaagctcgc
tttctgggctcggagaaactccaggagctgctcctggaggagagtctgaacagcagcacc
atcccccgggaggtgggggagtttgtggagctgctctggacggaggccctgggctgcctt
ggcgacgtgcttgccacccccgtctctgccatcagccctggggatgtcagcagagctgag
ggcgccctgctgcaggtgcacaaggctctgagcgctggggccggtcacagcgagctggct
gccctcatggccgagttctacagagccctgccccacaaggaccctgcccgccccaccccc
acggccaagatcctctctcagaaaagagacctctgccagctcatcagggacatcgtcagt
gtgagtgaggccacgctatggagctccacgccctcctctctggccaaataccgagccttg
cggtgcagcatggagcaggtgcaccctggcagtgccgagttctcagccgtggagaagctg
ctccacgacagttccaggccagtgcagatcaagaaggcgctgcgcgtctgcagggcggcg
gagctgcagagcttccggagacagctggggaacgtgcgcccgctgctccacgcctccgcg
cccggcagcttcgtgggcatcctgtccaggggcctgctgctgccgaagacgggtgtggag
caacatgggattgagaggaccgatgctgggaccctgggcagtggcatttacttcagtgac
gcggtcagcaccagtatgaagtactcgaagcccagcgccgctgatggcacgcgtgtcctg
gcggtgtgcgacgtggctctgggtcagtgcaaggagctggtgaagagggacttcaggctg
gtgtcggcacccgagggctaccacagcgtgcacggagtcagacggaccccgcgtggccct
tccgacttcgaggatgatgagtatgtggtgtacgatacgaaccaggtccagctgaagtac
gtcgtccagttctcggcgtgcgatgaccaggtcaaggagtttgagccctctgttgatgtt
tccgctcagcagctggagcagctggagcagcctctgaccttcgacacagtgtctgagcgc
gaagcagacggccccggggagtacagggacccgctgcgggaggtgaccgtcggtctgcag
gacagcgctggccggcccctcctcctgcagcgcgtgcacgtcaagggcaaagtgatggac
ctcctagcgcaggtcgtggtttttcagacctacaccaaccacagcgctgttcccatagag
gccaagtacgtgttccccctggatgagtcggcagcggtttgtgggtttgaggccttcatt
aacgggaagcacgtggtgggagaggtgaaagaaaaggagcaagctcggagagaatacaga
gaggccattgagaaggggcacggagcttacctcatggaccaggaggcgcctgatgtgttc
actataagtgttggcaacctccctccggagtccacggtgctgatcaaaatcacctacgtg
gcagagctcaccgtcagccacggcgacatcaccttccgcctgccgggcagcgtggcgccg
tggcaacagagccacgccctcacccaaaggacccaggacacagtgggcaaggttgctgtg
aatgaggtagagagcgagaggtgttttgccctggacatgtcagttgaaatgccctacgag
atcacagacatccgctctgtaacacaccagatcgaaatcaagaaaacgcagtgcaaggct
gtgatcagcacagagggaggcagctctctgggggccgatggcttccttctgtccatcacc
ttggctgagatgcacctgccccgaatgtgggtggagaatcacccggagaaagacagccag
gcgtgcatgctggtgttttatcccgagttcgaatccagcggtgaggtgggcgccggcgag
gttgttattgtcctggactcttccaattccatgaggggttcggcactacaggacgccagg
aaaattgctctgctggtgctgaaagccctgagctgcaaagttaacgtgctcttctttggt
acagactataaggaattgttcctctgctcccaggactgtaaatcttcctttgaagctgcc
aagaagtttattatgaccaatccaccagcggggggcggcactgagctctggaggccgcta
cgcactttcagcctcctggctccctcccgaggcgtcaggaacctcctcctgatttccgac
ggacacgtgcagaacgaggggctcaccctgcagctggccagggagaatgtcccacacacc
agagtcttcacgtgtggcgtcaggtccgcagccaacaggcacatgctgagatccctggct
cgggccggaggcggagcccacgagttcttcgacgcaaagaccaagcacacctggcaggag
aaggtgacggcccaggtgaagcgcatggcctctccgggctgcagctcggtgtcggtgaag
tggcagcagttccgctccggagcgccccctcctgtccaggcccctgcgcagctgctctct
ctcttcagcgactgccgcctcctcgtctacgggttcgtgccgcactgcacaagggccact
ctgacgggcaaggtgagcgatcgggagatcgagaccacggtcgccaccacagagctccag
aagaccaaaggcacgctgctgcacacactcgcggcgagagcggtcatcagagactacgaa
gaggggagcctccacgcggaagaatcggagcacgaggcgaggaaagcagagttaaaatcg
tacatcattggcctgagcaaagagtactcagtcgtgacgcagttcaccagcttcgtcgcc
attgaagaaagggatgaagaaaagcaagaatttggttctacagacatagaggagctgatt
gcaatggaagatgtggactgtctgccttacttggagtgggagagtcgaaaccagggttct
aaccaggaaaatgaggaggaagacgaagaagagatggacagagaagaccatgtgcttcag
tctcattctttgtctgaatctcattatgaatgtgccgaatatacatttctgcacatgcct
ctgtttgagcagagtgaagcccagctgaacgttccctatataaaacctacattttcgtgt
gtgacctccatggcccagtctccttccccgcctgtcgctgcgccgcagtgctctacagcg
ggcttcctcttttctgcttcaagcttccacccccctgcagcaccc
DBGET
integrated database retrieval system
