Lepisosteus oculatus (spotted gar): 102683364
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Entry
102683364 CDS
T07349
Symbol
nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102683364 (nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102683364 (nipbl)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
102683364 (nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
MIF4G
ARM_ECM29
Cnd3
Motif
Other DBs
NCBI-GeneID:
102683364
NCBI-ProteinID:
XP_015195855
Ensembl:
ENSLOCG00000012704
LinkDB
All DBs
Position
LG2:complement(54053540..54146760)
Genome browser
AA seq
2799 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQTVLTRNPNVFREKSMQNRYGVQG
GMMQQPMMPQYKMAQNSMHGSPAPSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVP
SPYAPQSPAGYMPYPHPPSYTQHQQIQQELHGSPLVSAPTYSGSPQRPVQPCLIVQTQPS
PQQNPSTPTLVASPMVPGGMRNIHDNKVSGQMSSNSANHHADNSRHGSNEDYLNMVHRLG
SEESDPSMRNASFPLRSPQSVCSPAGSDGTPKAGSRPPLILQSPPPYTSPRDAPPDLLMD
SPDRKKKQKKMKMSKEEKEQADKAAMYDIISSPSKDSTKLTLRLSRVKSSEMDPQGDLLP
GMDNSPDPEGDMAYNNMQYAGQPPKTPAAPQDVHRTNATQCLTQNEQAGFLPAQQVPVLQ
NTSVASAKQPQPPGVPMPGAPAQPLSATTPYDEVEMDALAEIERIERESAIERERCSKEV
QDKDKPLKKRKQDSYPQEPGAGGTAGSTGGAGGGGGGGNAGNKATPQEASAAGNGASRPA
LMVSIDLQQAGRAEGQLDPSLPAPTGATEAQKWTEEQRGVPAAASGPAGDGSVSGCQEEM
TGVLRLKPDNQPENPRRKSEDVQKAADGRPEVIKHRSETPKQKGSSDSKPETPKQKNESH
PETPRQKSVDGRPETPKHKHDNRRDSSGKPVSSEKRMEMSKHRHDGKPDSAKLKSEGRGP
ETPRQRPDGRPSSSSSESSRRDHDGHRQRSEDRPESERHRGDPSRIRRPDTPKSSSRGDH
DSRHGKSDSSRDRERDRERKQRNESGDSRERRSPEEQRSRPESPRVKQEPRTDSSSRLRT
DRPGFKSPSNRDERRSDGSKGRSDSHKQPPDTKPEFPTYLLGGKSGALKNFVIPKIKRDK
DGNVTQETRKSDSRDEKVKMEKMGLVEDLNKGAKPVVVLQKLTFDEVQKFIKEREDRNAR
SSKSGKNRPSSKSGKGGIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRTTVNEKPKY
AEVSSDEESDGTVESARKRHKKDRDKPWECEERERRGSGEHRRSGHFHEGRRSSGSRYRE
RSPDDSEEDSPPPSLSDIARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFSASIDNIL
ENLEDMDFTALADDDEIPQELLLGKHQLSELGSESAKIKAMGITSRIPADKLVKVLNILE
KNIQDGSKLSTLINHDNDTEDEERLWRDLIMERVTKSADACLTALNIMTSTHMPKAVYIE
DVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKI
CDIVSNMSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQ
LILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQCVVHLPSEKDS
NTEDEYDKKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFVQDLLS
TVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAVTSKMDQ
SSIDRILKRSSGNDDIQQLQKTLLDYLDENAETDPSLVFARKFYIAQWFRDTTTETEKAM
KTQNQKDEDSSEGTHHAKDIETTGEIMQKAEARKKFLRSIIKTTPLQFSTLKMNSDTVDY
EDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARL
DMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIK
ILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKEAMTRKI
LNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQLVDNLVEHILKYEESLA
DSENKSVNSNRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNTQSDFMVICNVAKI
LELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTHNYKFVWACF
NRYYGAITKLKTQHQEDPNSTVLTANKPALLRSLFTVGALCRHFNFDQEEFKGSNKVVIK
DKVLELLLYFTRHEDEEVQTKAIIGLGFLFIQHPSLMFEQDVKNLYNGILSDKNCSVNLK
IQVLKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGMSSSIMQLYLKQVLEAF
FHTQSNVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYT
GFIHMKAVAGIKMSYQVQQAIWASQDTIIRGFRQDEQHTALCSHLFTMVRGNRQHRRAFL
ISLLNLFDDSAKTDVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKE
SLRKEPRPRERKYCSEEDEDDISGSSEDGEVRRPKKSKRHVNSDSDSDSDMEAEDVEKVM
SRLPDNPAPLIDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRK
SSVHFNPRQTIEFLANDMANTEMTYEVKRKIVKQYLDFKLLMEHLDPDEEDEEGEASASA
NARNKAINALLGGSSPKNNTADTEDDESDGEEKGGAPGSSRKSRRGGESAEVAGHLNETV
EAMDVIAICCPKYKDRPQIARVIQKTSSGYSVHWMAGSYSGAWAEAKKRDGRKLVPWVDT
IKESDIIYKKIVLTSAHKLTNKVVQTLRSLYAAKDGTSS
NT seq
8400 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggattgctagcctcaca
gacttattaaaccagcttcctctcccatcccctctccctgccaccaccactaaaagcctg
ctgtacaatgggaggattgcagaagaagtcaactgccttctggcttgtcgggacgagaac
ctggtgtcacagcttgcgcacagcctcaaccaggtttccacagatcacatagaactgaag
gacaaccttggcagcgatgatccagagggggatattccagtgctgctgcagaccgtcctg
accaggaaccccaatgttttcagggagaaaagtatgcagaatcgatatggggttcagggc
ggtatgatgcagcagcccatgatgcctcagtacaagatggcacagaattccatgcatggc
agcccagcaccttccaactaccagcaaaccactatctctcacagcccttccagccgcttt
gttccaccacagacgagctctggtaatagatttatgcctcagcagaatagccctgtaccc
agcccttatgccccacagagccctgcaggatacatgccgtatccacaccctccaagctac
actcagcatcaacagatacagcaagagttacatggctcccctcttgtatctgcacctaca
tattcaggaagccctcagaggccggtgcagccctgtctgatagtgcaaactcagccctca
ccacagcagaacccatctaccccaactttagtggccagtcctatggttcctggcggcatg
aggaacattcatgataacaaggtttctgggcagatgtctagcaactccgctaaccaccat
gctgacaattccaggcatggatcaaatgaagattacctgaacatggtgcataggctagga
agtgaggaaagcgatccctccatgagaaacgcatccttccctctcagatccccccagtct
gtgtgctctccagcaggcagtgacgggaccccaaaagctggatccaggccgcccctcata
ttacagtccccacccccttacacctctcccagagacgctccaccagacctcttaatggac
tctccagacaggaagaagaagcagaagaaaatgaaaatgagcaaagaagaaaaagaacag
gcagacaaggcagcgatgtacgacatcatcagctctccatcaaaggactccacaaaactc
accttaagactttctcgtgtgaaatcttcagaaatggacccacagggagatctccttcct
ggaatggacaacagccccgatcctgagggagacatggcttataacaacatgcaatatgca
ggccagccgcccaagacgccagcggccccccaggatgtacaccgaaccaacgctacacag
tgcctgacgcagaacgagcaggccggctttctccctgcgcagcaggtgccggttttacaa
aacacgtcggtggcgtcggccaaacagccgcagcctcccggagtgccgatgccaggagct
cctgcccagcccctctccgccaccactccctacgacgaggtggaaatggacgctctggcg
gagatcgagaggatagagcgggagtctgccatcgagcgagagcgctgctcgaaagaggtg
caggataaagacaagccgctgaagaagcggaagcaggactcgtacccgcaggagcctggg
gccggtggaacggccggttctacaggcggggctggtggaggtggtggaggaggaaacgcc
gggaataaggccactcctcaggaggccagtgctgctggaaacggagctagccgtccggcc
ctgatggtgagcatcgacctgcagcaggccgggcgggcagagggccagcttgacccctct
cttcctgctcccactggcgctacagaggcgcagaaatggactgaggagcagcgcggcgtg
cccgctgctgcctctggcccggccggagatggctctgtcagtggctgtcaggaggagatg
acaggtgtcctcaggctcaaaccagacaaccagccagagaaccctaggaggaagtcagaa
gatgttcagaaggctgctgatgggagacctgaggtcattaaacataggtctgagactccc
aaacagaaagggagctcagacagtaagcctgagacccccaaacagaaaaatgagagccac
ccagaaacacccagacaaaagagtgtagatggcaggccagagacccccaaacacaagcac
gataaccgtcgggactccagtgggaagcccgtcagctcggagaaaaggatggagatgtcg
aaacacaggcatgatggcaaaccggattctgccaagttgaaatctgaaggcagagggcca
gagacacccaggcaaaggccagatgggcgcccatcatcctcttcctctgagtcttcacgc
cgcgaccacgatggtcacagacagcgatcagaggatcgacctgaatctgagcgacacagg
ggagatccttctaggatcaggaggcctgacacccctaagtcctcgagcagaggggatcac
gactccagacatggcaagtctgacagctcccgagacagggagagagaccgagagaggaag
cagagaaatgagtcgggggattctagggagagacgctcccctgaagagcagagatcccgc
cccgagagcccaagggtcaaacaggaaccgaggacagactccagcagccgactccgcaca
gacagacctggcttcaaatcccccagcaaccgggatgagcggcgttcagatggcagcaaa
ggaaggtcagactcgcataagcagccgcctgataccaagcctgagttccccacataccta
ctgggaggcaagtcgggagcactgaaaaactttgtaattcctaaaatcaaacgggacaaa
gatggtaatgtcactcaggaaacaaggaagtctgattccagggatgaaaaggtaaagatg
gagaagatgggccttgtagaggatttgaacaaaggagcgaaaccagtggtggtgcttcag
aagttaacttttgatgaagttcaaaaatttataaaggagagagaagacaggaatgcaagg
agctctaaatctgggaagaaccgaccatcctccaaatctggtaaaggtggaatagaccag
tcagtgctaaaggagctgcccccagagctgctggcggagattgagtccaccatgccactg
tgcgagcgggtgaagatgaacaagagaaaacgtaccacagtcaacgagaaaccaaaatat
gccgaagtcagctcagacgaagaaagcgacgggactgttgagtctgcccgaaagcggcac
aagaaggaccgggacaaaccgtgggagtgcgaggagcgggagcggaggggctcaggggag
caccggaggagcgggcacttccacgagggcaggaggagctcgggcagccgctaccgcgag
cgcagccccgacgactccgaggaggactccccaccacccagcctgagcgacattgccaga
aaaatgaagaaaaaagaaaagcagaaaaagaggaaagcatacgaacctaaacttacacct
gaagaaatgatggattcgtcaacttttaagaggttctcagccagcattgacaacattttg
gagaatttggaagacatggatttcactgcattggcggatgatgatgaaattccacaagag
ttactgttgggaaagcatcagcttagtgaactaggaagtgaatctgctaaaattaaagcc
atgggaattacaagcaggattccagcagataaactggtgaaggttttgaatattttagaa
aagaatatacaggatggttcaaaactttcgacactcattaaccatgataatgacactgag
gatgaggagagactttggcgggatctcatcatggagagagtgacaaaatctgctgatgct
tgtctcactgccctcaacattatgacttccacccatatgcccaaagcggtgtatattgaa
gacgtgatagagagggtcctacagtacactaaatttcacttgcagaacacactataccct
cagtatgatcctgtctacagggtggatccacatggaggtggcgttttgagttccaaggct
aagcgtgcaaaatgctccacccacaagcagcgagtgatcgtgatgctatataacaaaatc
tgtgatattgtcagcaacatgtctgagctgctagagatacagctgctcacagacactacc
attctgcaggtttcgtcaatgggcattacacccttttttgtggaaaatgtcagcgagctg
cagctgtgtgccatcaagttagtgactgctgtgttttcaagatatgaaaagcacagacag
ctgatactggaggagatctttacatccctagccagactgccaacgagtaagcgaagcttg
aggaacttcaggctgaacagcagtgacatggatggagagcccatgtacatacagatggtg
actgctctggtcctgcagctcattcagtgtgttgtgcatttgccatcggagaaggattct
aacactgaagatgaatatgacaaaaaggtggatcaagatgttctgataacaaattcttat
gaaaccgcaatgagaacagctcagaacttcctctctgtttttctcaaaaagtgtggcagt
aagcagggtgaggaggattaccggccactgtttgagaattttgtgcaagatctcctgtcc
actgttaacaagccagaatggcctgctgctgagctcctgctcagtctcctgggcaggttg
ctggtacatcagttcagtaacaagcagacagagatggcactgagggtggcttcccttgat
tatcttgggactgttgctgcaaggctcaggaaagatgcagtgacgagcaaaatggatcag
agttcgatagatcgcattctgaaacggtcttcgggtaatgatgatatccagcagcttcag
aagacattactggattacctggatgaaaacgctgagactgacccatcgttggtttttgcg
cggaagttctacattgctcagtggttccgggacactacaacagagacagaaaaggccatg
aagacgcagaaccagaaggatgaggattcatcagaggggacgcaccatgcaaaagacata
gagacgacgggagagatcatgcagaaagcagaggctcggaagaagttccttcgttcaatc
attaaaactacaccattgcaatttagcacattaaaaatgaactctgatactgtggactat
gaggattcctgcctgattgtccgatatttggcctccatgaggccgtttgcacagagcttc
gatatttatttaacacagattctgcgggttctgggagagagcgcaattgctgtccggacg
aaagccatgaaatgtctctcagaggtagtagctgtggatccaagcattctggccaggctg
gacatgcagcgtggtgttcatggacggttgatggataactccaccagtgtgagagaggca
gcagtggagctactaggacgcttcgttttgagtcggccacagcttactgagcagtattat
gatatgctaatagagagaattctggacactggtatcagtgtgaggaaaagggtaattaag
atcctccgagatatctgtcttgaacagccgacattcaataaaattacagagatgtgtgtg
aaaatgattcgcagagtcaatgatgaagaaggcattaagaaactagtgaatgaaacattc
cagaagctctggttcactcccactcccaatcatgataaagaagcgatgaccaggaaaata
ctcaatatcactgatgtggttgctgcctgcagagatactggttatgactggttcgagcag
cttcttcagaatttgttgaaatctgaagaggatgcctcttacaagccagcaaagaaggca
tgtgtacagcttgttgacaatctagtagagcatatcctcaagtatgaggaatctctagca
gattcggaaaataaaagtgtaaactccaaccgcctggttgcatgcattactactctgtac
ctgttcagcaagattcgtgcgcagctgatggtgaaacacgcgatgaccatgcagccgtac
ctcaccaccaagtgcaacacccagagtgacttcatggtcatctgcaacgtagccaagatc
ctggagctggtcgtgcctctgatggagcaccctagtgagactttcctcgccaccatcgag
gaggacctcatgaagctcatcattaaatatggcatgactgtggtacagcactgtgtgagc
tgcctgggggctgtggtcaataaagtcacacacaactacaagtttgtttgggcgtgcttc
aacaggtattatggcgcaataaccaagttaaagacgcagcatcaagaggatccaaacagc
actgttctcactgccaataaacctgcactacttcgttcactcttcactgttggtgcactg
tgtcgacattttaactttgaccaggaggagttcaaaggcagcaacaaggttgtcataaaa
gacaaggtactggagctgctgctctatttcaccagacatgaagatgaagaggtgcagaca
aaagccatcattggtttagggtttttgtttattcagcacccaagcttgatgtttgagcag
gatgtcaagaacctgtacaatggtatcctctcagacaagaactgctccgttaatctgaag
atccaggtcctgaagaacctgcagacttacctgcaggaagaggacacccgcatgcaggag
gctgaccgggagtggaaaaaactgtcgaaacaggaggacttaaaagaaatgggtgatata
tcttcaggcatgagcagttcaataatgcagctctacctcaaacaggttcttgaggcgttc
ttccacacgcaatccaacgttcgccattttgctctaaatgtaattgcccttacactaaac
caaggtctcattcacccagtccagtgtgtgccatacctgatagccatgggaacagacccc
gagcccagcatgaggaataaagcagatcagcagctggtagagattgataagaagtacaca
ggattcattcatatgaaggctgtggcagggataaagatgtcgtaccaggtacagcaagcc
atctgggcgtcccaggacacgatcatcagaggtttccgacaggacgagcagcacacggcc
ttgtgctcccaccttttcaccatggtgcgaggaaacaggcagcacagaagggccttcctc
atctccctgctcaacctcttcgacgacagtgctaaaacggatgtgaatatgctgttgtat
atagcggacaatctggcctgcttcccgtaccagacgcaggaggagcctcttttcataatg
catcacatagacatcacgctgtcggtatcaggcagcaacctgctccagtccttcaaggag
tccctgcggaaagaacccaggccgagggagcggaagtactgctccgaggaggatgaggat
gacatcagcggcagcagtgaggacggagaagtgaggcggccaaagaagtcgaagcggcac
gtgaactcggactcggactcggattccgacatggaggctgaggatgtagaaaaggtgatg
agcaggttaccagacaaccctgcccctctcatcgactttgccaacgcttcccaaggaatc
cttctcctcctggtcctcaagcaacacctaaagaatctgtatggattctccgacagtaaa
atccagaagtactccccgaccgagtctgcaaaagtgtacgacaaggctgtgaacaggaag
tcatcggtgcattttaacccccggcagacgatcgagtttcttgccaatgacatggcgaat
acggagatgacatacgaagtcaagagaaagatcgtcaagcagtaccttgattttaagtta
ctaatggagcacttggaccctgacgaggaggatgaggagggggaggcgtcggccagcgcg
aatgcccgaaataaagcgatcaatgcgctgctgggaggatccagccccaagaacaacacc
gcggacaccgaggacgacgagagcgatggagaggagaagggaggagcaccggggtcatca
agaaagtccaggcgaggtggagagtcggcagaagttgcaggccatttgaacgagactgtg
gaagccatggacgtcatcgcgatctgctgccctaagtacaaggaccgaccacagattgcc
agggtgatccagaagaccagcagcggctacagcgttcactggatggcaggctcttatagt
ggtgcctgggctgaggccaagaagcgagatggacgcaaactggtgccttgggtagatact
attaaagagtcggacatcatttacaagaaaattgttctgacgagcgcacataagctgact
aataaagtggttcagactttacgatcgctgtatgcagctaaggatgggacttccagctaa
DBGET
integrated database retrieval system
