KEGG   Lepisosteus oculatus (spotted gar): 102683407
Entry
102683407         CDS       T07349                                 
Symbol
sf3b5
Name
(RefSeq) splicing factor 3B subunit 5
  KO
K12832  splicing factor 3B subunit 5
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102683407 (sf3b5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:loc03041]
    102683407 (sf3b5)
Spliceosome [BR:loc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102683407 (sf3b5)
 Complex B
    102683407 (sf3b5)
 Complex C
   U2 SnRNP specific factors
    102683407 (sf3b5)
SSDB
Motif
Pfam: SF3b10 BcGHD
Other DBs
NCBI-GeneID: 102683407
NCBI-ProteinID: XP_015217892
Ensembl: ENSLOCG00000017352
UniProt: W5NLE8
LinkDB
Position
LG16:1078461..1080491
AA seq 86 aa
MTDRYNIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFSVAENES
KARVRFNLMEKMLQPCGPPADKPDDA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgacggaccgctacaacatccacagccagctggagcacttgcagtccaagtacatcggg
acgggccacgccgacaccaccaagtgggagtggctggtcaaccagcaccgggactcctac
tgctcctacatgggccacttcgacctgctcaactacttctccgtggccgagaacgagagc
aaggcccgggtgcgcttcaacctcatggagaagatgctgcagccctgcgggccgcccgcc
gacaagccagacgacgcctag

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